RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
SIK3-211ENST00000485363 TUFMP49411 452 aaKnown RBP17.13■□□□□ 0.33
SIK3-211ENST00000485363 WNT7BP56706 349 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 TEAD2Q15562 447 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 WSCD1Q658N2 575 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 SHKBP1Q8TBC3 707 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 C2orf15Q8WU43 125 aaKnown RBP17.13■□□□□ 0.33
SIK3-211ENST00000485363 HPS3Q969F9 1004 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 BORCS6Q96GS4 357 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
SIK3-211ENST00000485363 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 MAGEF1Q9HAY2 307 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 CFAP45Q9UL16 551 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
SIK3-211ENST00000485363 A0A1W2PRU2 124 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 EIF3DO15371 548 aaKnown RBP eCLIP17.12■□□□□ 0.33
SIK3-211ENST00000485363 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
SIK3-211ENST00000485363 FGF19O95750 216 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 ME1P48163 572 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 MGAT5BQ3V5L5 792 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 DNAJB7Q7Z6W7 309 aaPredicted RBP17.12■□□□□ 0.33
SIK3-211ENST00000485363 ITIH5Q86UX2 942 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 TMC8Q8IU68 726 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 TTC9BQ8N6N2 239 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 ZSCAN18Q8TBC5 510 aaPredicted RBP17.12■□□□□ 0.33
SIK3-211ENST00000485363 DNASE1L2Q92874 299 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 PSMG2Q969U7 264 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 ZSWIM3Q96MP5 696 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 SEPT5Q99719 369 aaPredicted RBP17.12■□□□□ 0.33
SIK3-211ENST00000485363 C7orf25Q9BPX7 421 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
SIK3-211ENST00000485363 LRRC3Q9BY71 257 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 BRD9Q9H8M2 597 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 PDE11AQ9HCR9 933 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 ITGA11Q9UKX5 1188 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 VPS13AQ96RL7 3174 aa17.12■□□□□ 0.33
SIK3-211ENST00000485363 ZFHX2Q9C0A1 2572 aaPredicted RBP17.11■□□□□ 0.33
SIK3-211ENST00000485363 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 SOAT2O75908 522 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 TMEM191BP0C7N4 346 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 PSMC3P17980 439 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 GRM2Q14416 872 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 UBXN2BQ14CS0 331 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 VEPH1Q14D04 833 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 SURF1Q15526 300 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
SIK3-211ENST00000485363 CSGALNACT2Q8N6G5 542 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 FAM200AQ8TCP9 573 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 SPPL2BQ8TCT7 592 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 E2F7Q96AV8 911 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 OSBPL6Q9BZF3 934 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 TRPV4Q9HBA0 871 aa17.11■□□□□ 0.33
SIK3-211ENST00000485363 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
SIK3-211ENST00000485363 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 FAM170BA6NMN3 283 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 HUS1O60921 280 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 KRT19P08727 400 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 VIPR2P41587 438 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 RBP5P82980 135 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 BFSP1Q12934 665 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 PKP1Q13835 747 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 VITQ6UXI7 678 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 EPM2AIP1Q7L775 607 aaPredicted RBP17.1■□□□□ 0.33
SIK3-211ENST00000485363 LRRTM3Q86VH5 581 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 ZNF507Q8TCN5 953 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 IRF7Q92985 503 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 NELL2Q99435 816 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 MTMR12Q9C0I1 747 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 HEBP1Q9NRV9 189 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
SIK3-211ENST00000485363 LRRN2O75325 713 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 TNNC2P02585 160 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 HAPLN1P10915 354 aaPredicted RBP17.09■□□□□ 0.33
SIK3-211ENST00000485363 GLULP15104 373 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 CD72P21854 359 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 GABRR2P28476 465 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 GDI1P31150 447 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 HOXD13P35453 343 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 TSPY1Q01534 308 aa17.09■□□□□ 0.33
SIK3-211ENST00000485363 DNM1Q05193 864 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms