RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 LPIN2Q92539 896 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 DDX17Q92841 729 aaKnown RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 OSBPL9Q96SU4 736 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 NMRK2Q9NPI5 230 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
CCDC66-219ENST00000484441 ZNHIT2Q9UHR6 403 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 STXBP5LQ9Y2K9 1186 aa6.32□□□□□ -1.4
CCDC66-219ENST00000484441 WDR27A2RRH5 827 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 H3BML4 177 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 YY2O15391 372 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 NUDT3O95989 172 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 AHSGP02765 367 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 CT47B1P0C2W7 299 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 FBLP22087 321 aaKnown RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 PLA2G5P39877 138 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 NPTX2P47972 431 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 MRPS35P82673 323 aaKnown RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 GTF2H3Q13889 308 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 PTPRRQ15256 657 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 EPM2AIP1Q7L775 607 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 GRAMD1CQ8IYS0 662 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 FAM109AQ8N4B1 249 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 TNPO1Q92973 898 aaKnown RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 BBC3Q96PG8 261 aaPredicted RBP6.31□□□□□ -1.4
CCDC66-219ENST00000484441 CGRRF1Q99675 332 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 RIOX1Q9H6W3 641 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 LRIT1Q9P2V4 623 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 INSL6Q9Y581 213 aa6.31□□□□□ -1.4
CCDC66-219ENST00000484441 PEX1O43933 1283 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 SOAT2O75908 522 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 PPP3CBP16298 524 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 PHKA1P46020 1223 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 PREPLQ4J6C6 727 aaPredicted RBP6.3□□□□□ -1.4
CCDC66-219ENST00000484441 ODR4Q5SWX8 454 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 ZNF362Q5T0B9 420 aaPredicted RBP6.3□□□□□ -1.4
CCDC66-219ENST00000484441 TAF2Q6P1X5 1199 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 USP37Q86T82 979 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 FAM9AQ8IZU1 332 aaPredicted RBP6.3□□□□□ -1.4
CCDC66-219ENST00000484441 PSD4Q8NDX1 1056 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 MYCBPAPQ8TBZ2 947 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 TAAR9Q96RI9 348 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 CRAMP1Q96RY5 1269 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 SLAMF7Q9NQ25 335 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 ZIM2Q9NZV7 527 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 GABBR1Q9UBS5 961 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 PCDHA1Q9Y5I3 950 aa6.3□□□□□ -1.4
CCDC66-219ENST00000484441 ARHGEF17Q96PE2 2063 aaPredicted RBP6.29□□□□□ -1.4
CCDC66-219ENST00000484441 A0A088AWK7 358 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 H3BUI4 141 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 AP1G1O43747 822 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 DNAJB5O75953 348 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 KIF20AO95235 890 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 GNAI2P04899 355 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 PIM1P11309 404 aaPredicted RBP6.29□□□□□ -1.4
CCDC66-219ENST00000484441 HSPA6P17066 643 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 NDUFV1P49821 464 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 HNRNPMP52272 730 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC66-219ENST00000484441 EXOSC9Q06265 439 aaKnown RBP6.29□□□□□ -1.4
CCDC66-219ENST00000484441 STRIP1Q5VSL9 837 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 ZNF575Q86XF7 245 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 ADGRG3Q86Y34 549 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 DENND1CQ8IV53 801 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 TPH2Q8IWU9 490 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 SLC35G2Q8TBE7 412 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 CAGE1Q8TC20 777 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 PGBD1Q96JS3 809 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 LRFN3Q9BTN0 628 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 ANLNQ9NQW6 1124 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 TLK1Q9UKI8 766 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 COX11Q9Y6N1 276 aa6.29□□□□□ -1.4
CCDC66-219ENST00000484441 A0A0B4J269 797 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 MAPK10P53779 464 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 CACNA2D1P54289 1103 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 NXPH1P58417 271 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 RAB1AP62820 205 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 ITIH3Q06033 890 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 TUBB3Q13509 450 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 RAVER1Q8IY67 606 aaKnown RBP6.28□□□□□ -1.4
CCDC66-219ENST00000484441 SH2D3CQ8N5H7 860 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 MTFMTQ96DP5 389 aaKnown RBP6.28□□□□□ -1.4
CCDC66-219ENST00000484441 HEPHQ9BQS7 1158 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 RSAD1Q9HA92 442 aa6.28□□□□□ -1.4
CCDC66-219ENST00000484441 CCDC151A5D8V7 595 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 PPFIA2O75334 1257 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 UBXN7O94888 489 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 HDCP19113 662 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 SOX8P57073 446 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 BOP1Q14137 746 aaKnown RBP6.27□□□□□ -1.41
CCDC66-219ENST00000484441 NFE2Q16621 373 aaPredicted RBP6.27□□□□□ -1.41
CCDC66-219ENST00000484441 TXNRD1Q16881 649 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
CCDC66-219ENST00000484441 CXorf57Q6NSI4 855 aaKnown RBP6.27□□□□□ -1.41
CCDC66-219ENST00000484441 SLC30A10Q6XR72 485 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms