RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HCRTO43612 131 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 MYL4P12829 197 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 GJA1P17302 382 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 TNNI1P19237 187 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 PAX3P23760 479 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 ACAT1P24752 427 aaKnown RBP13.22□□□□□ -0.29
MSH5-216ENST00000484309 PNPLA4P41247 253 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 CASP4P49662 377 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 RBP5P82980 135 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 PSMD2Q13200 908 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 HTR4Q13639 388 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 MYBPC2Q14324 1141 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 SURF1Q15526 300 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 RTL10Q7L3V2 364 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 OSTM1Q86WC4 334 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 WDR49Q8IV35 697 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 NPAS3Q8IXF0 933 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 THEM5Q8N1Q8 247 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 ELMOD1Q8N336 334 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 FGF14Q92915 247 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 MCRS1Q96EZ8 462 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 FNBP1Q96RU3 617 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 RPP25Q9BUL9 199 aaKnown RBP13.22□□□□□ -0.29
MSH5-216ENST00000484309 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
MSH5-216ENST00000484309 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 IGSF9Q9P2J2 1179 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 SNX9Q9Y5X1 595 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 KIF26AQ9ULI4 1882 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 HUS1O60921 280 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 MYL1P05976 194 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 CFHP08603 1231 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 CCR2P41597 374 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 SNRPFP62306 86 aaKnown RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 PNOCQ13519 176 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 PSMD6Q15008 389 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 CCDC142Q17RM4 750 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 DUOXA2Q1HG44 320 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 IQCEQ6IPM2 695 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 CENPPQ6IPU0 288 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 POTEHQ6S545 545 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 PDZD4Q76G19 769 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 LRRC52Q8N7C0 313 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 CCDC47Q96A33 483 aaKnown RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 ZNF512Q96ME7 567 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 SEPT5Q99719 369 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 KXD1Q9BQD3 176 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 DUSP12Q9UNI6 340 aa13.21□□□□□ -0.29
MSH5-216ENST00000484309 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
MSH5-216ENST00000484309 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 RHOBTB3O94955 611 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 CLSTN1O94985 981 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 NR3C1P04150 777 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 MGAT5BQ3V5L5 792 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 PRSS36Q5K4E3 855 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 TRAPPC11Q7Z392 1133 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 SMYD4Q8IYR2 804 aaPredicted RBP13.2□□□□□ -0.3
MSH5-216ENST00000484309 ADGRF2Q8IZF7 708 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
MSH5-216ENST00000484309 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 GOLGA5Q8TBA6 731 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 FAM200AQ8TCP9 573 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 ZNF516Q92618 1163 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 MFSD14AQ96MC6 490 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 LPIN3Q9BQK8 851 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 ASAH2Q9NR71 780 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 DDX43Q9NXZ2 648 aaKnown RBP13.2□□□□□ -0.3
MSH5-216ENST00000484309 ABI2Q9NYB9 513 aaPredicted RBP13.2□□□□□ -0.3
MSH5-216ENST00000484309 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
MSH5-216ENST00000484309 FBXL21Q9UKT6 434 aa13.2□□□□□ -0.3
MSH5-216ENST00000484309 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 PDXKO00764 312 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 CST3P01034 146 aaPredicted RBP13.19□□□□□ -0.3
MSH5-216ENST00000484309 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 EPHB3P54753 998 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 TSPY1Q01534 308 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 MYO1EQ12965 1108 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 PLD1Q13393 1074 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 SOWAHAQ2M3V2 549 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 CYP4A22Q5TCH4 519 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
MSH5-216ENST00000484309 GPR152Q8TDT2 470 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms