RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CLUHO75153 1309 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 HAUS5O94927 633 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 PSMG1O95456 288 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 CYP1A1P04798 512 aaPredicted RBP20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 NSFP46459 744 aaKnown RBP20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 SLC34A1Q06495 639 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 RNASEH2BQ5TBB1 312 aaKnown RBP20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 CEP128Q6ZU80 1094 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 NLRX1Q86UT6 975 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 ALLCQ8N6M5 410 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 ST6GALNAC4Q9H4F1 302 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 RABGEF1Q9UJ41 708 aa20.83■□□□□ 0.93
RPUSD3-216ENST00000484134 C2orf71A6NGG8 1288 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 ZWINTO95229 277 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 P4HBP07237 508 aaKnown RBP20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 TROVE2P10155 538 aaKnown RBP eCLIP20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 SERPINB3P29508 390 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 GCLCP48506 637 aaPredicted RBP20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 STAT2P52630 851 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 WDR72Q3MJ13 1102 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 EFHC2Q5JST6 749 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 NSL1Q96IY1 281 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 ZDHHC15Q96MV8 337 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 RIT2Q99578 217 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 VCXQ9H320 206 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 TAS2R1Q9NYW7 299 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 CPSF2Q9P2I0 782 aaKnown RBP20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 BTAF1O14981 1849 aa20.83■□□□□ 0.92
RPUSD3-216ENST00000484134 ZNF536O15090 1300 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 GYG2O15488 501 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 DHX15O43143 795 aaKnown RBP20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 HNRNPCL1O60812 293 aaKnown RBP20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 SSTR1P30872 391 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 NCKAP1LP55160 1127 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 TFDP1Q14186 410 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 SLC39A4Q6P5W5 647 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 MFSD7Q6UXD7 560 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 ZC3H18Q86VM9 953 aaKnown RBP20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 SCOCQ9UIL1 159 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 TBX20Q9UMR3 447 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 CETN2P41208 172 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 EAPPQ56P03 285 aaPredicted RBP20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 MTHFD1LQ6UB35 978 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 TTC7BQ86TV6 843 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 MZB1Q8WU39 189 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 HAUS1Q96CS2 278 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 MFSD14AQ96MC6 490 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 MXRA8Q9BRK3 442 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 PPP1R12CQ9BZL4 782 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 KCNH7Q9NS40 1196 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 KRT82Q9NSB4 513 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 WASF2Q9Y6W5 498 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
RPUSD3-216ENST00000484134 ZBED4O75132 1171 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SKIP12755 728 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 CACNA2D1P54289 1103 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 GEMIN4P57678 1058 aaKnown RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 GCNT1Q02742 428 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 MORF4L2Q15014 288 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 RASA2Q15283 850 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 MSS51Q4VC12 460 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SP8Q8IXZ3 490 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 ZFAND2BQ8WV99 257 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 GATA6Q92908 595 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 MANSC1Q9H8J5 431 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 PCDHB2Q9Y5E7 798 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 PPEF1O14829 653 aaPredicted RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 RTN3O95197 1032 aaPredicted RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 MTM1Q13496 603 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 UGCGQ16739 394 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SAMD1Q6SPF0 538 aaPredicted RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 CCNJLQ8IV13 435 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SCYL3Q8IZE3 742 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 TMEM161BQ8NDZ6 487 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 ACER1Q8TDN7 264 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 ZNF516Q92618 1163 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SKA1Q96BD8 255 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 TRIM11Q96F44 468 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SLITRK1Q96PX8 696 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 WDR83Q9BRX9 315 aaKnown RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 ZCWPW1Q9H0M4 648 aa20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 SSU72Q9NP77 194 aaKnown RBP20.81■□□□□ 0.92
RPUSD3-216ENST00000484134 TJP3O95049 919 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 GYS1P13807 737 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 KCNA3P22001 575 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 GLRA2P23416 452 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 RPS6KA3P51812 740 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 POLE2P56282 527 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 SNRPFP62306 86 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 CYP24A1Q07973 514 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 RFX8Q6ZV50 586 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 BANPQ8N9N5 519 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 CFAP61Q8NHU2 1237 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 TMC2Q8TDI7 906 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 TMEM121Q9BTD3 319 aa20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 STX18Q9P2W9 335 aaKnown RBP20.8■□□□□ 0.92
RPUSD3-216ENST00000484134 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms