RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 NRLP54845 237 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 SOX4Q06945 474 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 PPP2R5DQ14738 602 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 BMT2Q1RMZ1 405 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ZC2HC1CQ53FD0 456 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 PRSS36Q5K4E3 855 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 FAM26FQ5R3K3 315 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 KRBA2Q6ZNG9 492 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 EPM2AIP1Q7L775 607 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 NT5DC4Q86YG4 428 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 HS6ST3Q8IZP7 471 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 CEP120Q8N960 986 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF507Q8TCN5 953 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 IRF7Q92985 503 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 FAM126AQ9BYI3 521 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 GTPBP4Q9BZE4 634 aaKnown RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ASB7Q9H672 318 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF334Q9HCZ1 680 aaPredicted RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 SERTAD1Q9UHV2 236 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 HOOK1Q9UJC3 728 aaKnown RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 DERAQ9Y315 318 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 NUB1Q9Y5A7 615 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.83□□□□□ -0.68
CPSF4-213ENST00000484112 VWA8A3KMH1 1905 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 TCHHQ07283 1943 aa10.83□□□□□ -0.68
CPSF4-213ENST00000484112 NOTCH4Q99466 2003 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 PATJQ8NI35 1801 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 TTC26A0AVF1 554 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 H7C4K7 107 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 PODXLO00592 558 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF263O14978 683 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ABLIM3O94929 683 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF202O95125 648 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ATF2P15336 505 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 PSMC3P17980 439 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 FCARP24071 287 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CCNE1P24864 410 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 VIPR2P41587 438 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CCR2P41597 374 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 AFMP43652 599 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CCR3P51677 355 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 FAM160A1Q05DH4 1040 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 PPP2R3AQ06190 1150 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CUL4BQ13620 913 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 SLC10A6Q3KNW5 377 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CTXN3Q4LDR2 81 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 IQCEQ6IPM2 695 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 SLC8B1Q6J4K2 584 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 VITQ6UXI7 678 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 SYCP3Q8IZU3 236 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ELMOD1Q8N336 334 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CELF5Q8N6W0 485 aaKnown RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 GOLGA5Q8TBA6 731 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CHAMP1Q96JM3 812 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF512Q96ME7 567 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 ZSWIM3Q96MP5 696 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 RPF1Q9H9Y2 349 aaKnown RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 KIAA1586Q9HCI6 787 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 AVENQ9NQS1 362 aaPredicted RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CPSF3Q9UKF6 684 aaKnown RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 AGO2Q9UKV8 859 aaKnown RBP10.82□□□□□ -0.68
CPSF4-213ENST00000484112 INSL5Q9Y5Q6 135 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 PIAS3Q9Y6X2 628 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 GPR179Q6PRD1 2367 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 CACNA1AO00555 2505 aa10.82□□□□□ -0.68
CPSF4-213ENST00000484112 IL18RAPO95256 599 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 HARSP12081 509 aaKnown RBP10.81□□□□□ -0.68
CPSF4-213ENST00000484112 CXCL12P48061 93 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 CASP5P51878 434 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 SATB1Q01826 763 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 TWF1Q12792 350 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 SIM2Q14190 667 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-213ENST00000484112 KCNB1Q14721 858 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 PPM1JQ5JR12 505 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 LAIR1Q6GTX8 287 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 SLC39A4Q6P5W5 647 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 YAF2Q8IY57 180 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 TCEAL8Q8IYN2 117 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 FMR1NBQ8N0W7 255 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-213ENST00000484112 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 ZSCAN18Q8TBC5 510 aaPredicted RBP10.81□□□□□ -0.68
CPSF4-213ENST00000484112 POMGNT1Q8WZA1 660 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 SMARCD2Q92925 531 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 ASB16Q96NS5 453 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 HAPLN2Q9GZV7 340 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 SLITRK6Q9H5Y7 841 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 EXOC1Q9NV70 894 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 FBXL5Q9UKA1 691 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 UBQLN1Q9UMX0 589 aaKnown RBP10.81□□□□□ -0.68
CPSF4-213ENST00000484112 C2CD2Q9Y426 696 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
CPSF4-213ENST00000484112 CHURC1-FNTBB4DL54 471 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms