RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CDC42EP1Q00587 391 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 FSTL1Q12841 308 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 KRT32Q14532 448 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 MYBPC3Q14896 1274 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SEPT2Q15019 361 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CDSNQ15517 529 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 EMC4Q5J8M3 183 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 STEAP3Q658P3 488 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SLFN12LQ6IEE8 588 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ARHGEF18Q6ZSZ5 1173 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ENOSF1Q7L5Y1 443 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CPOQ8IVL8 374 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SH2D3CQ8N5H7 860 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 STT3BQ8TCJ2 826 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ADAMTS15Q8TE58 950 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 AFAP1L1Q8TED9 768 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ASB15Q8WXK1 588 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 GOLGA1Q92805 767 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 FOXRED1Q96CU9 486 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 C18orf8Q96DM3 657 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 MBD6Q96DN6 1003 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 RRP36Q96EU6 259 aaKnown RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 VMP1Q96GC9 406 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CLPTM1LQ96KA5 538 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 FOXB1Q99853 325 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PDGFDQ9GZP0 370 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SCAND2PQ9GZW5 306 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 WDCPQ9H6R7 721 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 TMEM8AQ9HCN3 771 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CD248Q9HCU0 757 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ZCCHC17Q9NP64 241 aaKnown RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 NECTIN3Q9NQS3 549 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 TDP1Q9NUW8 608 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 DTLQ9NZJ0 730 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 NFKBIL1Q9UBC1 381 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CFDP1Q9UEE9 299 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 DENND2AQ9ULE3 1009 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SYNPO2Q9UMS6 1093 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 USP18Q9UMW8 372 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PAXBP1Q9Y5B6 917 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHA3Q9Y5H8 950 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 KAT6BQ8WYB5 2073 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 TCRBV5S2A0A599 114 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CLCA1A8K7I4 914 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CYR61O00622 381 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 SLC27A2O14975 620 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 GPR42O15529 346 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 USO1O60763 962 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 FAM155BO75949 473 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 PCDH8O95206 1070 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 PTMAP06454 111 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 MMEP08473 750 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ITGA2BP08514 1039 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ITGA5P08648 1049 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 FTH1P19P0C7X4 201 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 MYL4P12829 197 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 HNRNPLP14866 589 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 GLULP15104 373 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 NPR1P16066 1061 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 UBA7P41226 1012 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 MLLT6P55198 1093 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 NRG3P56975 720 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 SLC6A3Q01959 620 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 UBE3AQ05086 875 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 RAB39AQ14964 217 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 NOMO1Q15155 1222 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 DLGAP5Q15398 846 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 SLC44A4Q53GD3 710 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 KHDC1LQ5JSQ8 128 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ARL6IP4Q66PJ3 421 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 HAUS3Q68CZ6 603 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CRIP3Q6Q6R5 217 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 KLHL17Q6TDP4 642 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 RNF44Q7L0R7 432 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 RHOT1Q8IXI2 618 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 KBTBD2Q8IY47 623 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 Q8N1X5 172 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 GLB1L3Q8NCI6 653 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ARRDC4Q8NCT1 418 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CCDC150Q8NCX0 1101 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 DNERQ8NFT8 737 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CALML6Q8TD86 181 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 OTUD7AQ8TE49 926 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 KBTBD7Q8WVZ9 684 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 IPCEF1Q8WWN9 437 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 GAB3Q8WWW8 586 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ATP2A3Q93084 1043 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 HVCN1Q96D96 273 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 SNX22Q96L94 193 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ZSWIM3Q96MP5 696 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 MPHOSPH8Q99549 860 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 BAG1Q99933 345 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 DEF6Q9H4E7 631 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ELAC1Q9H777 363 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 MANSC1Q9H8J5 431 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 SEPSECSQ9HD40 501 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms