RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 COG2Q14746 738 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 EIF4HQ15056 248 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 RABL6Q3YEC7 729 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 KANK2Q63ZY3 851 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 TRIM68Q6AZZ1 485 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 ATG9AQ7Z3C6 839 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 POLNQ7Z5Q5 900 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 MTDHQ86UE4 582 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 TEX11Q8IYF3 940 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 RPUSD2Q8IZ73 545 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 NLGN4XQ8N0W4 816 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 LRRC47Q8N1G4 583 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 ACER1Q8TDN7 264 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 ZNF384Q8TF68 577 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 TGFBRAP1Q8WUH2 860 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 CACTINQ8WUQ7 758 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 FBXW5Q969U6 566 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 CHFRQ96EP1 664 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 MAML3Q96JK9 1138 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 EXOC2Q96KP1 924 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 DRC1Q96MC2 740 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 GLT1D1Q96MS3 346 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 SPATC1LQ9H0A9 340 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 DHX36Q9H2U1 1008 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 C12orf65Q9H3J6 166 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 RPAP3Q9H6T3 665 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 UCKL1Q9NWZ5 548 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 GALNT8Q9NY28 637 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 RAI14Q9P0K7 980 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 SAP30BPQ9UHR5 308 aaKnown RBP4.31□□□□□ -1.72
LRCH3-217ENST00000483442 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 ZBTB21Q9ULJ3 1066 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 ATP23Q9Y6H3 246 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 MAST2Q6P0Q8 1798 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 REV3LO60673 3130 aa4.31□□□□□ -1.72
LRCH3-217ENST00000483442 PHIPQ8WWQ0 1821 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 ELP1O95163 1332 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 UMODL1Q5DID0 1318 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 MROH7Q68CQ1 1323 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 MYADML2A6NDP7 307 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 DCXO43602 365 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 ASGR1P07306 291 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 MMEP08473 750 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 FAM153BP0C7A2 387 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 AKR1A1P14550 325 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 IL9P15248 144 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 VCAM1P19320 739 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 MSX2P35548 267 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 RFX5P48382 616 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 USP14P54578 494 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 GSTO1P78417 241 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 GUCY1A3Q02108 690 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 TAP1Q03518 808 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 RASGRF1Q13972 1273 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 ACAP1Q15027 740 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 PCOLCEQ15113 449 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 SF3A1Q15459 793 aaKnown RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 ZNF568Q3ZCX4 644 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 ZMAT1Q5H9K5 638 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 CCSAPQ6IQ19 270 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 FILIP1Q7Z7B0 1213 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 DEFB128Q7Z7B8 93 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 KLHDC9Q8NEP7 349 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 PTPRN2Q92932 1015 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 NSUN4Q96CB9 384 aaKnown RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 SCLYQ96I15 445 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 SCYL1Q96KG9 808 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 NOL10Q9BSC4 688 aaKnown RBP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 TANGO6Q9C0B7 1094 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 HIPK3Q9H422 1215 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 MROH8Q9H579 483 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 DNAJC18Q9H819 358 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 AATFQ9NY61 560 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRCH3-217ENST00000483442 FAM184BQ9ULE4 1060 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 CNPY2Q9Y2B0 182 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 PTPRFP10586 1907 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 XIRP2A4UGR9 3374 aa4.3□□□□□ -1.72
LRCH3-217ENST00000483442 SMCHD1A6NHR9 2005 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 RFX7Q2KHR2 1363 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PRRC2BQ5JSZ5 2229 aaKnown RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 DOCK1Q14185 1865 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 TRBV23-1A0A0A0MS06 115 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 A0A0U1RQG5 324 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 CCDC66A2RUB6 948 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PRAMEF25A6NGN4 478 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 KIF28PB7ZC32 967 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 LPXNO60711 386 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 BAG3O95817 575 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 SNAI1O95863 264 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 HLA-DOAP06340 250 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 KCNA5P22460 613 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 TGM1P22735 817 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 DNM2P50570 870 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 HGFACQ04756 655 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms