RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
HMG20B-210ENST00000483417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.752e-10■■■■■ 53.8
HMG20B-210ENST00000483417 INTS13Q9NVM9 706 aa10.36□□□□□ -0.75
HMG20B-210ENST00000483417 DPP3Q9NY33 737 aa10.36□□□□□ -0.75
HMG20B-210ENST00000483417 CLUHO75153 1309 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 ANO9A1A5B4 782 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 SPDYE4A6NLX3 237 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 PODXLO00592 558 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 PIRO00625 290 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 TRAPPC3O43617 180 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 ABLIM3O94929 683 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 IL18RAPO95256 599 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 VNN1O95497 513 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 POU2F2P09086 479 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 HNRNPA1P09651 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMG20B-210ENST00000483417 LAMP2P13473 410 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 TNNI1P19237 187 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 HOXA9P31269 272 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 PPP1R2P41236 205 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 GCLMP48507 274 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 CLDN10P78369 228 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 POU5F1Q01860 360 aaKnown RBP10.35□□□□□ -0.75
HMG20B-210ENST00000483417 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
HMG20B-210ENST00000483417 C9orf57Q5W0N0 161 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 SLC8B1Q6J4K2 584 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 ANKS3Q6ZW76 656 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 SV2AQ7L0J3 742 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 RTL10Q7L3V2 364 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 TRAPPC11Q7Z392 1133 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 GAS2L3Q86XJ1 694 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 CD302Q8IX05 232 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 PRSS33Q8NF86 280 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 TMC2Q8TDI7 906 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 SEMA4DQ92854 862 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 MTMR12Q9C0I1 747 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMG20B-210ENST00000483417 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 AGAP1Q9UPQ3 857 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 FRMD4BQ9Y2L6 1034 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 CDY1Q9Y6F8 540 aa10.35□□□□□ -0.75
HMG20B-210ENST00000483417 SCN1AP35498 2009 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 ZNF318Q5VUA4 2279 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 ANHXE9PGG2 379 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 SYN3O14994 580 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 MAPK13O15264 365 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 C8AP07357 584 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CCDC192P0DO97 292 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 NPR3P17342 541 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CYP3A5P20815 502 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 LRPAP1P30533 357 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 AARSP49588 968 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMG20B-210ENST00000483417 NTHL1P78549 312 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 NHLH1Q02575 133 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 TCF15Q12870 199 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 DUOXA2Q1HG44 320 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CBWD6Q4V339 395 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CBWD3Q5JTY5 395 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CBWD5Q5RIA9 395 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 TDRD10Q5VZ19 366 aaKnown RBP10.34□□□□□ -0.75
HMG20B-210ENST00000483417 FOXR2Q6PJQ5 311 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 POTEHQ6S545 545 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
HMG20B-210ENST00000483417 FRMD5Q7Z6J6 570 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 SUGP1Q8IWZ8 645 aaKnown RBP10.34□□□□□ -0.75
HMG20B-210ENST00000483417 SLC44A3Q8N4M1 653 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 AOPEPQ8N6M6 819 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 ZNF461Q8TAF7 563 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 RSAD2Q8WXG1 361 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 NXPE3Q969Y0 559 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 SUSD3Q96L08 255 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CGRRF1Q99675 332 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 PIDD1Q9HB75 910 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 CBX8Q9HC52 389 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 UBQLN1Q9UMX0 589 aaKnown RBP10.34□□□□□ -0.75
HMG20B-210ENST00000483417 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 DERAQ9Y315 318 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 C2CD2Q9Y426 696 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 NFE2L3Q9Y4A8 694 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 WDFY4Q6ZS81 3184 aa10.34□□□□□ -0.75
HMG20B-210ENST00000483417 ARHGEF37A1IGU5 675 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 WDR27A2RRH5 827 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 M0QZQ0 153 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 NARSO43776 548 aaKnown RBP10.33□□□□□ -0.76
HMG20B-210ENST00000483417 ITGB3P05106 788 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 EPB41P11171 864 aaKnown RBP10.33□□□□□ -0.76
HMG20B-210ENST00000483417 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 POLR2BP30876 1174 aaKnown RBP10.33□□□□□ -0.76
HMG20B-210ENST00000483417 GBP2P32456 591 aaPredicted RBP10.33□□□□□ -0.76
HMG20B-210ENST00000483417 ZNF165P49910 485 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 CDR1P51861 262 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 LILRA4P59901 499 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 MYL6P60660 151 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 ROR1Q01973 937 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 BFSP1Q12934 665 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 CT47A1Q5JQC4 288 aaPredicted RBP10.33□□□□□ -0.76
HMG20B-210ENST00000483417 PPM1LQ5SGD2 360 aa10.33□□□□□ -0.76
HMG20B-210ENST00000483417 LRSAM1Q6UWE0 723 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms