RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 TOB2Q14106 344 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 EMC2Q15006 297 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 ANGPT1Q15389 498 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 NPY5RQ15761 445 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 UBXN11Q5T124 520 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 XP32Q5T750 250 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 NCAPH2Q6IBW4 605 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 COLGALT2Q8IYK4 626 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 GPR65Q8IYL9 337 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 ADSSL1Q8N142 457 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CACTIN-AS1Q8N1I8 211 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 DTWD2Q8NBA8 298 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 HDAC7Q8WUI4 952 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 SMG7Q92540 1137 aaKnown RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CCDC43Q96MW1 224 aaKnown RBP6.51□□□□□ -1.37
CSDE1-207ENST00000483407 GAD1Q99259 594 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 COLEC11Q9BWP8 271 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 SEMA4AQ9H3S1 761 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 PLEKHA4Q9H4M7 779 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 MINDY3Q9H8M7 445 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 PIDD1Q9HB75 910 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 RXFP1Q9HBX9 757 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 KCNMB3Q9NPA1 279 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 MARCH5Q9NX47 278 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 ZDHHC7Q9NXF8 308 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 KCNJ14Q9UNX9 436 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 GIT1Q9Y2X7 761 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 IPPQ9Y573 584 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 ZFHX4Q86UP3 3567 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 BAHCC1Q9P281 2608 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 CHD8Q9HCK8 2581 aa6.51□□□□□ -1.37
CSDE1-207ENST00000483407 LOXHD1Q8IVV2 1947 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 EVPLQ92817 2033 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CACNA1BQ00975 2339 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 KMT2EQ8IZD2 1858 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 ARL5CA6NH57 179 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 PI15O43692 258 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 TSPAN1O60635 241 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 VSIG8P0DPA2 414 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 SRFP11831 508 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 NME2P22392 152 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 ID4P47928 161 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 SOX9P48436 509 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 SCNN1GP51170 649 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 PTENP60484 403 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CYP4A11Q02928 519 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 FAM160A1Q05DH4 1040 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 POU5F1BQ06416 359 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 DSC1Q08554 894 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 COL9A2Q14055 689 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CTTNQ14247 550 aaKnown RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 USP41Q3LFD5 358 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 FUT10Q6P4F1 479 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 PIK3AP1Q6ZUJ8 805 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 TPH2Q8IWU9 490 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 RNF168Q8IYW5 571 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 SMG8Q8ND04 991 aaKnown RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 FEZF2Q8TBJ5 459 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 KCNG4Q8TDN1 519 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 WASF1Q92558 559 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 DYDC2Q96IM9 177 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CPB2Q96IY4 423 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 AIFM3Q96NN9 605 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 APOL6Q9BWW8 343 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 EIF2AQ9BY44 585 aaKnown RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 TM6SF1Q9BZW5 370 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 BRMS1Q9HCU9 246 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 RGL1Q9NZL6 768 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 WRAP73Q9P2S5 460 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-207ENST00000483407 EPS15L1Q9UBC2 864 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 CYP8B1Q9UNU6 501 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 HES2Q9Y543 173 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 STK36Q9NRP7 1315 aa6.5□□□□□ -1.37
CSDE1-207ENST00000483407 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 TGM5O43548 720 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 NARSO43776 548 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 N4BP1O75113 896 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 TADA2AO75478 443 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 RFPL2O75678 378 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SLITRK3O94933 977 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 LMNAP02545 664 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 MYBP10242 640 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ALAS2P22557 587 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 MBTD1Q05BQ5 628 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 GRIK3Q13003 919 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SNAP47Q5SQN1 464 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 LIN9Q5TKA1 542 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 PSAPL1Q6NUJ1 521 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SLC27A1Q6PCB7 646 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ZC3H14Q6PJT7 736 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms