RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 C2orf15Q8WU43 125 aaKnown RBP16.25■□□□□ 0.19
COL16A1-213ENST00000482910 EDAQ92838 391 aa16.25■□□□□ 0.19
COL16A1-213ENST00000482910 NXPE3Q969Y0 559 aa16.25■□□□□ 0.19
COL16A1-213ENST00000482910 HPDLQ96IR7 371 aa16.25■□□□□ 0.19
COL16A1-213ENST00000482910 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
COL16A1-213ENST00000482910 L1RE1Q9UN81 338 aa16.25■□□□□ 0.19
COL16A1-213ENST00000482910 MTMR11A4FU01 709 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 IKBKBO14920 756 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
COL16A1-213ENST00000482910 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-213ENST00000482910 VNN2O95498 520 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 FAM163BP0C2L3 166 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 OR4Q2P0C623 313 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 PTPN2P17706 415 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 NR2F2P24468 414 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 ATICP31939 592 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 LHX1P48742 406 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-213ENST00000482910 PLD1Q13393 1074 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 PABPC1LQ4VXU2 614 aaKnown RBP16.24■□□□□ 0.19
COL16A1-213ENST00000482910 CENPPQ6IPU0 288 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 ELMOD1Q8N336 334 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 PLEKHO2Q8TD55 490 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 ZNF516Q92618 1163 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 VRTNQ9H8Y1 702 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 IGSF9Q9P2J2 1179 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
COL16A1-213ENST00000482910 POLIQ9UNA4 740 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 SORCS3Q9UPU3 1222 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 MAPK8IP1Q9UQF2 711 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
COL16A1-213ENST00000482910 TECTAO75443 2155 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-213ENST00000482910 GABRDO14764 452 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 MICAL2O94851 1124 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-213ENST00000482910 PPP1R2P41236 205 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 PRCPP42785 496 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 CASP4P49662 377 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 ZXDAP98168 799 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 MYL7Q01449 175 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 SOWAHAQ2M3V2 549 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 TMEM31Q5JXX7 168 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 CEP135Q66GS9 1140 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 SCARA3Q6AZY7 606 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 CLEC17AQ6ZS10 378 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
COL16A1-213ENST00000482910 UBALD2Q8IYN6 164 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 DCP1BQ8IZD4 617 aaKnown RBP16.23■□□□□ 0.19
COL16A1-213ENST00000482910 LEMD2Q8NC56 503 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 SPPL2BQ8TCT7 592 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 MYADMQ96S97 322 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 TMEM209Q96SK2 561 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 MKNK1Q9BUB5 465 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 LIMD1Q9UGP4 676 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 CDH7Q9ULB5 785 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 YIPF1Q9Y548 306 aa16.23■□□□□ 0.19
COL16A1-213ENST00000482910 CST3P01034 146 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 RHOP08100 348 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 LAMP2P13473 410 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 PCSK1P29120 753 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 PSMC2P35998 433 aaKnown RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 TUFMP49411 452 aaKnown RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 EPHA5P54756 1037 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 TSPY1Q01534 308 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 TWF1Q12792 350 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 DUSP4Q13115 394 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 ADAM9Q13443 819 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 TRPC3Q13507 836 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 NFE2Q16621 373 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 IQCEQ6IPM2 695 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 GET4Q7L5D6 327 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 SMYD4Q8IYR2 804 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 ADGRF2Q8IZF7 708 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 SYAP1Q96A49 352 aaPredicted RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 PGLYRP2Q96PD5 576 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 CRISPLD1Q9H336 500 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 C11orf16Q9NQ32 467 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 HCFC1R1Q9NWW0 138 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 DDX43Q9NXZ2 648 aaKnown RBP16.22■□□□□ 0.19
COL16A1-213ENST00000482910 RAPGEFL1Q9UHV5 662 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 ASB3Q9Y575 518 aa16.22■□□□□ 0.19
COL16A1-213ENST00000482910 PRR33A8MZF0 331 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 ZNF197O14709 1029 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 TACC1O75410 805 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 AKAP3O75969 853 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 WARSP23381 471 aaKnown RBP16.21■□□□□ 0.19
COL16A1-213ENST00000482910 ALDH1A3P47895 512 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 VAMP7P51809 220 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 EPHB3P54753 998 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 NTHL1P78549 312 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 LRRC63Q05C16 580 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 SIGLEC14Q08ET2 396 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 ZACNQ401N2 412 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 SLC39A12Q504Y0 691 aa16.21■□□□□ 0.19
COL16A1-213ENST00000482910 INTS6LQ5JSJ4 861 aaKnown RBP16.21■□□□□ 0.19
COL16A1-213ENST00000482910 TDRD10Q5VZ19 366 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms