RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ZNF334Q9HCZ1 680 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-212ENST00000482251 AVENQ9NQS1 362 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-212ENST00000482251 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-212ENST00000482251 FAM13BQ9NYF5 915 aa11.3□□□□□ -0.6
CPSF4-212ENST00000482251 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
CPSF4-212ENST00000482251 AGAP1Q9UPQ3 857 aa11.3□□□□□ -0.6
CPSF4-212ENST00000482251 MYO15AQ9UKN7 3530 aa11.3□□□□□ -0.6
CPSF4-212ENST00000482251 KPNA7A9QM74 516 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ZNF197O14709 1029 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 HCRTO43612 131 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ECI2O75521 394 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
CPSF4-212ENST00000482251 CYP11A1P05108 521 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 TMEM191BP0C7N4 346 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ATF6P18850 670 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ACAT1P24752 427 aaKnown RBP11.29□□□□□ -0.6
CPSF4-212ENST00000482251 HOXD13P35453 343 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 VIPR2P41587 438 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ALDH1A3P47895 512 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 CYP2J2P51589 502 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 EPHB3P54753 998 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 AMPD3Q01432 767 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 PLD1Q13393 1074 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 CUL4BQ13620 913 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ANGPT1Q15389 498 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 TPRG1Q6ZUI0 275 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 CSGALNACT2Q8N6G5 542 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ZSCAN18Q8TBC5 510 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 OXCT2Q9BYC2 517 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-212ENST00000482251 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 ZCWPW1Q9H0M4 648 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 HSPBP1Q9NZL4 362 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 DSEQ9UL01 958 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
CPSF4-212ENST00000482251 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 CLIC2O15247 247 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 GPR15P49685 360 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 NUBP1P53384 320 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 EPHA5P54756 1037 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 CYP4F8P98187 520 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SLC44A4Q53GD3 710 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 VITQ6UXI7 678 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 UNC13DQ70J99 1090 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 LRRTM3Q86VH5 581 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 NT5DC4Q86YG4 428 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 OR5B17Q8NGF7 314 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 BORCS6Q96GS4 357 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 ZFP14Q9HCL3 533 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SLC39A2Q9NP94 309 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 HEBP1Q9NRV9 189 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 AGPAT3Q9NRZ7 376 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 TMLHEQ9NVH6 421 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SIX4Q9UIU6 781 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 MAFFQ9ULX9 164 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SIT1Q9Y3P8 196 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 MTF2Q9Y483 593 aaPredicted RBP11.28□□□□□ -0.6
CPSF4-212ENST00000482251 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 TICRRQ7Z2Z1 1910 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 COL4A2P08572 1712 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 USP34Q70CQ2 3546 aa11.28□□□□□ -0.6
CPSF4-212ENST00000482251 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 GFRA3O60609 400 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 DLATP10515 647 aaKnown RBP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 GLULP15104 373 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 GABRR2P28476 465 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 PNPLA4P41247 253 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 PFKPQ01813 784 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 VEPH1Q14D04 833 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 SDHAF4Q5VUM1 108 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 EPM2AIP1Q7L775 607 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 LEMD2Q8NC56 503 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 CXorf38Q8TB03 319 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
CPSF4-212ENST00000482251 SCFD1Q8WVM8 642 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 SMARCD2Q92925 531 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 RSPRY1Q96DX4 576 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 ANKRD36BP1Q96IX9 119 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 PI4K2AQ9BTU6 479 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 LRRC3Q9BY71 257 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 ATXN3LQ9H3M9 355 aa11.27□□□□□ -0.61
CPSF4-212ENST00000482251 BRD9Q9H8M2 597 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms