RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 SUSD3Q96L08 255 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 MRPL45Q9BRJ2 306 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 COLEC11Q9BWP8 271 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 NT5C1AQ9BXI3 368 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 RC3H2Q9HBD1 1191 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 DSEQ9UL01 958 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 ADGRG1Q9Y653 693 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 ATP8B3O60423 1300 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 HAX1O00165 279 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 ZSCAN12O43309 604 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 MED7O43513 233 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 B4GALT3O60512 393 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 CCDC175P0C221 793 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 ODC1P11926 461 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 GZMAP12544 262 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 TYMPP19971 482 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
IFT88-206ENST00000482172 GNA15P30679 374 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
IFT88-206ENST00000482172 LHX1P48742 406 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 NDST1P52848 882 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 DEFB103AP81534 67 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 TRIM72Q6ZMU5 477 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 ADGRF2Q8IZF7 708 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 PDCL2Q8N4E4 241 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 OLIG1Q8TAK6 271 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 KBTBD7Q8WVZ9 684 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.33□□□□□ -0.28
IFT88-206ENST00000482172 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 MTIF3Q9H2K0 278 aaKnown RBP13.33□□□□□ -0.28
IFT88-206ENST00000482172 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 LUC7LQ9NQ29 371 aaKnown RBP13.33□□□□□ -0.28
IFT88-206ENST00000482172 CACNG4Q9UBN1 327 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 NENFQ9UMX5 172 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 PPP2R2CQ9Y2T4 447 aa13.33□□□□□ -0.28
IFT88-206ENST00000482172 COL4A6Q14031 1691 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 A0A087X0T9 212 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 DDX3XO00571 662 aaKnown RBP eCLIP13.32□□□□□ -0.28
IFT88-206ENST00000482172 NRP1O14786 923 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 KIF4AO95239 1232 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 GALTP07902 379 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 FAM228BP0C875 321 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 VDRP11473 427 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 SYN1P17600 705 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 CHRNB2P17787 502 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 IGFBP6P24592 240 aaPredicted RBP13.32□□□□□ -0.28
IFT88-206ENST00000482172 OR1G1P47890 313 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 EPHB4P54760 987 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 FMO1Q01740 532 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
IFT88-206ENST00000482172 ELAVL2Q12926 359 aaKnown RBP13.32□□□□□ -0.28
IFT88-206ENST00000482172 STILQ15468 1287 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 PPP1R2P3Q6NXS1 205 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 METTL23Q86XA0 190 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 OR6B3Q8NGW1 331 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 LNX1Q8TBB1 728 aaPredicted RBP13.32□□□□□ -0.28
IFT88-206ENST00000482172 SLC20A1Q8WUM9 679 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 ZNF606Q8WXB4 792 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 TNIP3Q96KP6 325 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.32□□□□□ -0.28
IFT88-206ENST00000482172 CWH43Q9H720 699 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 NAGPAQ9UK23 515 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 PCDHGC3Q9UN70 934 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 STXBP5LQ9Y2K9 1186 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 NR2E3Q9Y5X4 410 aa13.32□□□□□ -0.28
IFT88-206ENST00000482172 GOLGA6L9A6NEM1 432 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 ZBBXA8MT70 800 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 A8MXQ7 604 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 ZNF263O14978 683 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 SYN3O14994 580 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 THAP12O43422 761 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 TADA2AO75478 443 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 GJB5O95377 273 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 CYP1A1P04798 512 aaPredicted RBP13.31□□□□□ -0.28
IFT88-206ENST00000482172 MMEP08473 750 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 SLC11A1P49279 550 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
IFT88-206ENST00000482172 ZNF394Q53GI3 561 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 WSCD1Q658N2 575 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
IFT88-206ENST00000482172 GLYCTKQ8IVS8 523 aa13.31□□□□□ -0.28
IFT88-206ENST00000482172 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
IFT88-206ENST00000482172 SP7Q8TDD2 431 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms