RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 YIPF1Q9Y548 306 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 SNX9Q9Y5X1 595 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 NR3C1P04150 777 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 DUSP4Q13115 394 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 PNOCQ13519 176 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 SNW1Q13573 536 aaKnown RBP20.14■□□□□ 0.81
HSPG2-210ENST00000481644 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 SLC9A9Q8IVB4 645 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 TMEM86AQ8N2M4 240 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 PDCL2Q8N4E4 241 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 ENGASEQ8NFI3 743 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 FGF13Q92913 245 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 HPDLQ96IR7 371 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 ZNF512Q96ME7 567 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-210ENST00000481644 CRISPLD1Q9H336 500 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 AVENQ9NQS1 362 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-210ENST00000481644 GDAP2Q9NXN4 497 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 MAPK8IP1Q9UQF2 711 aa20.14■□□□□ 0.81
HSPG2-210ENST00000481644 MRPS23Q9Y3D9 190 aaKnown RBP20.14■□□□□ 0.81
HSPG2-210ENST00000481644 CALUO43852 315 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-210ENST00000481644 PLD1Q13393 1074 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 SLC5A9Q2M3M2 681 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 TOP6BLQ8N6T0 577 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 ATAD1Q8NBU5 361 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 TMEM174Q8WUU8 243 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 RSAD2Q8WXG1 361 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 ING5Q8WYH8 240 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 NXPE3Q969Y0 559 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 ASIC4Q96FT7 647 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 CEP72Q9P209 647 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 TRAF3IP3Q9Y228 551 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 SLC27A5Q9Y2P5 690 aa20.13■□□□□ 0.81
HSPG2-210ENST00000481644 ALDH1A3P47895 512 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 CASP4P49662 377 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 PDZD4Q76G19 769 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-210ENST00000481644 BMP8AQ7Z5Y6 402 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 NPAS3Q8IXF0 933 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 DCP1BQ8IZD4 617 aaKnown RBP20.12■□□□□ 0.81
HSPG2-210ENST00000481644 GUF1Q8N442 669 aaKnown RBP20.12■□□□□ 0.81
HSPG2-210ENST00000481644 TTC9BQ8N6N2 239 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 PBXIP1Q96AQ6 731 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 GZF1Q9H116 711 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-210ENST00000481644 DDX43Q9NXZ2 648 aaKnown RBP20.12■□□□□ 0.81
HSPG2-210ENST00000481644 HSFX1Q9UBD0 423 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 DUSP12Q9UNI6 340 aa20.12■□□□□ 0.81
HSPG2-210ENST00000481644 ANHXE9PGG2 379 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ZNF197O14709 1029 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
HSPG2-210ENST00000481644 CDR1P51861 262 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 EPHB3P54753 998 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 MYL7Q01449 175 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 TSPY1Q01534 308 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 SMARCB1Q12824 385 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 HTR4Q13639 388 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 PRSS36Q5K4E3 855 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 CYP4A22Q5TCH4 519 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 CEP135Q66GS9 1140 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 LRRTM3Q86VH5 581 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ADGRF2Q8IZF7 708 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ST13P5Q8NFI4 369 aaPredicted RBP20.11■□□□□ 0.81
HSPG2-210ENST00000481644 SPATA18Q8TC71 538 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 PLEKHO2Q8TD55 490 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 PARD3BQ8TEW8 1205 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 C2orf15Q8WU43 125 aaKnown RBP20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ZNF516Q92618 1163 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 TIGD1Q96MW7 591 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 RMND1Q9NWS8 449 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 RAPGEFL1Q9UHV5 662 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 HOOK1Q9UJC3 728 aaKnown RBP20.11■□□□□ 0.81
HSPG2-210ENST00000481644 FRMD4BQ9Y2L6 1034 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 HCN4Q9Y3Q4 1203 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 NUMBLQ9Y6R0 609 aa20.11■□□□□ 0.81
HSPG2-210ENST00000481644 PHACTR2O75167 634 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SOAT2O75908 522 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SMC2O95347 1197 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 CST3P01034 146 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-210ENST00000481644 CEBPBP17676 345 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 LHX1P48742 406 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 TUFMP49411 452 aaKnown RBP20.1■□□□□ 0.81
HSPG2-210ENST00000481644 TRPC3Q13507 836 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SOWAHAQ2M3V2 549 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 MGAT5BQ3V5L5 792 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 MTSS1LQ765P7 747 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 DPH6Q7L8W6 267 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 HS6ST3Q8IZP7 471 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SLC44A3Q8N4M1 653 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 LEMD2Q8NC56 503 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SPPL2BQ8TCT7 592 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 TCEAL4Q96EI5 215 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 SEPT5Q99719 369 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-210ENST00000481644 ACBD6Q9BR61 282 aa20.1■□□□□ 0.81
HSPG2-210ENST00000481644 ABI2Q9NYB9 513 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-210ENST00000481644 LRRIQ3A6PVS8 624 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-210ENST00000481644 NARSO43776 548 aaKnown RBP20.09■□□□□ 0.81
HSPG2-210ENST00000481644 MYL4P12829 197 aa20.09■□□□□ 0.81
HSPG2-210ENST00000481644 NR2F2P24468 414 aa20.09■□□□□ 0.81
HSPG2-210ENST00000481644 ACAT1P24752 427 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms