RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 GPR17Q13304 367 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 HTR4Q13639 388 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 SOWAHAQ2M3V2 549 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 PABPC1LQ4VXU2 614 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 PRSS36Q5K4E3 855 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 ISM2Q6H9L7 571 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 CENPPQ6IPU0 288 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 GPIHBP1Q8IV16 184 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 NPAS3Q8IXF0 933 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 FGF13Q92913 245 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 FGF14Q92915 247 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 CGRRF1Q99675 332 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 PLA2G2FQ9BZM2 168 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 ZNF334Q9HCZ1 680 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 EPS15L1Q9UBC2 864 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 DPP7Q9UHL4 492 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 ITGA11Q9UKX5 1188 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 SNX9Q9Y5X1 595 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 NCANO14594 1321 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 DMDP11532 3685 aa12.28□□□□□ -0.44
RAPGEF1-207ENST00000481260 MUC6Q6W4X9 2439 aa12.27□□□□□ -0.44
RAPGEF1-207ENST00000481260 OR6C75A6NL08 312 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 VNN1O95497 513 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 ATF6P18850 670 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 TNNI1P19237 187 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 ELF1P32519 619 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 PMS1P54277 932 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYL6P60660 151 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 RBP5P82980 135 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 PSMD2Q13200 908 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 DUOXA2Q1HG44 320 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 UVSSAQ2YD98 709 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 SV2CQ496J9 727 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZCWPW2Q504Y3 356 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 STXBP5Q5T5C0 1151 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 TDRD10Q5VZ19 366 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 TPGS2Q68CL5 300 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 NT5DC4Q86YG4 428 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 WDR49Q8IV35 697 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 CACTINQ8WUQ7 758 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 MCRS1Q96EZ8 462 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 HPDLQ96IR7 371 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 KXD1Q9BQD3 176 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 LRRC3Q9BY71 257 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.45
RAPGEF1-207ENST00000481260 ANHXE9PGG2 379 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 XYLBO75191 536 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 AKAP3O75969 853 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 TNNC2P02585 160 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 LRG1P02750 347 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 POU2F2P09086 479 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 BMP6P22004 513 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 PRCPP42785 496 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 RAP1GAPP47736 663 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 PSMC1P62191 440 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYBPC2Q14324 1141 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 KCNB1Q14721 858 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 CEP135Q66GS9 1140 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 CYP26C1Q6V0L0 522 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 LIMS2Q7Z4I7 341 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 TMC8Q8IU68 726 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 SLC44A3Q8N4M1 653 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 SHKBP1Q8TBC3 707 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 PARD3BQ8TEW8 1205 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 GIPC2Q8TF65 315 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 ACSF2Q96CM8 615 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 ANKRD36BP1Q96IX9 119 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 ZNF560Q96MR9 790 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 SEPT5Q99719 369 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 DDX43Q9NXZ2 648 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 ABI2Q9NYB9 513 aaPredicted RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 CDH7Q9ULB5 785 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 SORCS3Q9UPU3 1222 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 MRPS23Q9Y3D9 190 aaKnown RBP12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 PCDHA5Q9Y5H7 936 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 VPS13AQ96RL7 3174 aa12.26□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYO15AQ9UKN7 3530 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 TRIM49BA6NDI0 452 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 GOLGA6L4A6NEF3 574 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 PDXKO00764 312 aa12.25□□□□□ -0.45
RAPGEF1-207ENST00000481260 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms