RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.61
SIK3-210ENST00000480468 RBM38Q9H0Z9 239 aaKnown RBP11.21□□□□□ -0.61
SIK3-210ENST00000480468 UBE2TQ9NPD8 197 aaPredicted RBP11.21□□□□□ -0.61
SIK3-210ENST00000480468 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
SIK3-210ENST00000480468 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
SIK3-210ENST00000480468 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
SIK3-210ENST00000480468 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 TBX3O15119 743 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 OR6B1O95007 311 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 TRIM49P0CI25 452 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 TRIM49CP0CI26 452 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.62
SIK3-210ENST00000480468 PPP4CP60510 307 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 PSMC6P62333 389 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 CETN1Q12798 172 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 BFSP1Q12934 665 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 MPP3Q13368 585 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 MORF4L2Q15014 288 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.62
SIK3-210ENST00000480468 SFT2D3Q587I9 215 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 ZNF746Q6NUN9 644 aaPredicted RBP11.21□□□□□ -0.62
SIK3-210ENST00000480468 C16orf86Q6ZW13 317 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 TTC7BQ86TV6 843 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 FAM71AQ8IYT1 594 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 TCP10LQ8TDR4 215 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.62
SIK3-210ENST00000480468 MZB1Q8WU39 189 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 SLC5A5Q92911 643 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 SLC35B4Q969S0 331 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 HERPUD2Q9BSE4 406 aa11.21□□□□□ -0.62
SIK3-210ENST00000480468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 RSPH10B2B2RC85 870 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 CASQ2O14958 399 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 USP1O94782 785 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 RSPH10BP0C881 870 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 SNHG28P0DPA3 235 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 MYL2P10916 166 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 EIF4BP23588 611 aaKnown RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 PLOD1Q02809 727 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 TMEM62Q0P6H9 643 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 SYDE2Q5VT97 1194 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 KLHDC10Q6PID8 442 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 ADGRD1Q6QNK2 874 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 RBM44Q6ZP01 1051 aaKnown RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 MARVELD2Q8N4S9 558 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 JADE3Q92613 823 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 VPS37BQ9H9H4 285 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 CHORDC1Q9UHD1 332 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 MINPP1Q9UNW1 487 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 TELO2Q9Y4R8 837 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 hCG_2014768A0A024R1R8 64 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 C15orf38-AP3S2A0A0A6YYH1 394 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 ATP2A1O14983 1001 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 TFAP2AP05549 437 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 STAT3P40763 770 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 CDK8P49336 464 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 FMO1Q01740 532 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 DRICH1Q6PGQ1 229 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 STXBP4Q6ZWJ1 553 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 ARPINQ7Z6K5 226 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 FNDC8Q8TC99 324 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 FAM81BQ96LP2 452 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 CYTH2Q99418 400 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 FAIMQ9NVQ4 179 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 THEGQ9P2T0 379 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 SEL1LQ9UBV2 794 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 BARX2Q9UMQ3 279 aaPredicted RBP11.2□□□□□ -0.62
SIK3-210ENST00000480468 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
SIK3-210ENST00000480468 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
SIK3-210ENST00000480468 WDR91A4D1P6 747 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 PMM2O15305 246 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 DENRO43583 198 aaKnown RBP11.19□□□□□ -0.62
SIK3-210ENST00000480468 CLPTM1O96005 669 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 ETV4P43268 484 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 DLG1Q12959 904 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 EPC2Q52LR7 807 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 SLC44A4Q53GD3 710 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 EFHC1Q5JVL4 640 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 RFX8Q6ZV50 586 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 ARHGEF19Q8IW93 802 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 TEKT1Q969V4 418 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 DNAJC1Q96KC8 554 aaKnown RBP11.19□□□□□ -0.62
SIK3-210ENST00000480468 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 MRPS26Q9BYN8 205 aaKnown RBP11.19□□□□□ -0.62
SIK3-210ENST00000480468 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
SIK3-210ENST00000480468 AGPAT3Q9NRZ7 376 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 SHOC2Q9UQ13 582 aa11.19□□□□□ -0.62
SIK3-210ENST00000480468 SUGT1Q9Y2Z0 365 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms