RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 ADGRF2Q8IZF7 708 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 TOP6BLQ8N6T0 577 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 CMASQ8NFW8 434 aaPredicted RBP12.96□□□□□ -0.33
CCM2-212ENST00000480382 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 SYAP1Q96A49 352 aaPredicted RBP12.96□□□□□ -0.33
CCM2-212ENST00000480382 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 ZNF707Q96C28 371 aaPredicted RBP12.96□□□□□ -0.33
CCM2-212ENST00000480382 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 MMS19Q96T76 1030 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 UHRF1Q96T88 793 aaPredicted RBP12.96□□□□□ -0.33
CCM2-212ENST00000480382 OXCT2Q9BYC2 517 aaPredicted RBP12.96□□□□□ -0.33
CCM2-212ENST00000480382 XYLT2Q9H1B5 865 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
CCM2-212ENST00000480382 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 IKBKBO14920 756 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 HCRTO43612 131 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 SEC24AO95486 1093 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 VNN2O95498 520 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 ATICP31939 592 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 MTHFRP42898 656 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 CDR1P51861 262 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 TNNC1P63316 161 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 ENPEPQ07075 957 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 WDR72Q3MJ13 1102 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 SLC39A12Q504Y0 691 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 TPGS2Q68CL5 300 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 TMEM86AQ8N2M4 240 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 KBTBD7Q8WVZ9 684 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 RIPOR3Q96MK2 946 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 CEP63Q96MT8 703 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 ZCWPW1Q9H0M4 648 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 CYP4F11Q9HBI6 524 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
CCM2-212ENST00000480382 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
CCM2-212ENST00000480382 PTPRDP23468 1912 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 PRRG1O14668 218 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 CCL16O15467 120 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 HLA-DRAP01903 254 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 HNRNPA1P09651 372 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCM2-212ENST00000480382 HOXA9P31269 272 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 ELF1P32519 619 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 MXI1P50539 228 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 NLRP12P59046 1061 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 MYL7Q01449 175 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 ZP2Q05996 745 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 GPR17Q13304 367 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 ATAT1Q5SQI0 421 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 LIMS2Q7Z4I7 341 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 ADHFE1Q8IWW8 467 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 TTC9BQ8N6N2 239 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 MLKLQ8NB16 471 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 TAS1R2Q8TE23 839 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 NECTIN4Q96NY8 510 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 PHF7Q9BWX1 381 aaPredicted RBP12.94□□□□□ -0.34
CCM2-212ENST00000480382 PRKD2Q9BZL6 878 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 CRISPLD1Q9H336 500 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 SMYD3Q9H7B4 428 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 PIDD1Q9HB75 910 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 TMEM8AQ9HCN3 771 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.346e-6■■■■■ 48.1
CCM2-212ENST00000480382 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
CCM2-212ENST00000480382 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 ARMCX3Q9UH62 379 aaPredicted RBP12.94□□□□□ -0.34
CCM2-212ENST00000480382 RWDD2AQ9UIY3 292 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 YIPF1Q9Y548 306 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 INSL5Q9Y5Q6 135 aa12.94□□□□□ -0.34
CCM2-212ENST00000480382 BDP1A6H8Y1 2624 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 GABRDO14764 452 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 STX10O60499 249 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 PAPLNO95428 1278 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 LRG1P02750 347 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
CCM2-212ENST00000480382 GTF2H1P32780 548 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 RAP1GAPP47736 663 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 LHX1P48742 406 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
CCM2-212ENST00000480382 TSPY1Q01534 308 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 CBWD6Q4V339 395 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
CCM2-212ENST00000480382 INTS6LQ5JSJ4 861 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms