RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SLFN12LQ6IEE8 588 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 WDR5BQ86VZ2 330 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 NT5DC4Q86YG4 428 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 ATAD1Q8NBU5 361 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 RSPRY1Q96DX4 576 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 LOXL4Q96JB6 756 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 PARVGQ9HBI0 331 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 USP18Q9UMW8 372 aa14.42□□□□□ -0.1
ABCF1-206ENST00000479542 TIMM13Q9Y5L4 95 aaPredicted RBP14.42□□□□□ -0.1
ABCF1-206ENST00000479542 DPYSL4O14531 572 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 HNRNPDLO14979 420 aaKnown RBP14.41□□□□□ -0.1
ABCF1-206ENST00000479542 BMP15O95972 392 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 ADRB1P08588 477 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 DDX6P26196 483 aaKnown RBP eCLIP14.41□□□□□ -0.15e-6■■□□□ 14.2
ABCF1-206ENST00000479542 MATR3P43243 847 aaKnown RBP eCLIP14.41□□□□□ -0.1
ABCF1-206ENST00000479542 SIM2Q14190 667 aaPredicted RBP14.41□□□□□ -0.1
ABCF1-206ENST00000479542 SPPL2BQ8TCT7 592 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 BPIFB1Q8TDL5 484 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 BICD1Q96G01 975 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 CALML4Q96GE6 196 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 LRRC3BQ96PB8 259 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 PGLYRP2Q96PD5 576 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 FIZ1Q96SL8 496 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 ZCWPW1Q9H0M4 648 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 ATXN3LQ9H3M9 355 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 SEMA4GQ9NTN9 838 aa14.41□□□□□ -0.1
ABCF1-206ENST00000479542 THG1LQ9NWX6 298 aaKnown RBP14.41□□□□□ -0.1
ABCF1-206ENST00000479542 NUP210Q8TEM1 1887 aaPredicted RBP14.4□□□□□ -0.1
ABCF1-206ENST00000479542 VWA3AA6NCI4 1184 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 TRAK2O60296 914 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 OR4Q2P0C623 313 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 GABRR2P28476 465 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 LIMK1P53667 647 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 AMPD2Q01433 879 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
ABCF1-206ENST00000479542 SPAG1Q07617 926 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 RAD51AP2Q09MP3 1159 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 SPEM2Q0P670 501 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 VEPH1Q14D04 833 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 GPR158Q5T848 1215 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 REEP2Q9BRK0 252 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 IL21Q9HBE4 155 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 BLOC1S4Q9NUP1 217 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 SLC27A5Q9Y2P5 690 aa14.4□□□□□ -0.1
ABCF1-206ENST00000479542 CACNA1BQ00975 2339 aa14.4□□□□□ -0.11
ABCF1-206ENST00000479542 EPG5Q9HCE0 2579 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 ACACBO00763 2458 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 ATG13O75143 517 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 AKAP3O75969 853 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 LONP1P36776 959 aaKnown RBP14.39□□□□□ -0.11
ABCF1-206ENST00000479542 POSTNQ15063 836 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 ITPRIPL2Q3MIP1 535 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 WDR44Q5JSH3 913 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 TXNDC11Q6PKC3 985 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 PRR23CQ6ZRP0 262 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 CAMKK1Q8N5S9 505 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 MYCT1Q8N699 235 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 FAM200AQ8TCP9 573 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 TMEM209Q96SK2 561 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 FAM83CQ9BQN1 747 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 KIF9Q9HAQ2 790 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 SPTBN2O15020 2390 aa14.39□□□□□ -0.11
ABCF1-206ENST00000479542 DCDC2BA2VCK2 349 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 SLC38A8A6NNN8 435 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 CHURC1-FNTBB4DL54 471 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 TRDMT1O14717 391 aaKnown RBP14.38□□□□□ -0.11
ABCF1-206ENST00000479542 FAM13AO94988 1023 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
ABCF1-206ENST00000479542 UBA7P41226 1012 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 FNTBP49356 437 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 MCM2P49736 904 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 TAF6P49848 677 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
ABCF1-206ENST00000479542 TMEM132DQ14C87 1099 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 RABEP1Q15276 862 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 ZRSR1Q15695 479 aaKnown RBP14.38□□□□□ -0.11
ABCF1-206ENST00000479542 TMEM196Q5HYL7 178 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 STXBP5Q5T5C0 1151 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 SLC39A4Q6P5W5 647 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 PRR23BQ6ZRT6 265 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 GPBP1Q86WP2 473 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 METTL23Q86XA0 190 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 CMTM8Q8IZV2 173 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 OR10T2Q8NGX3 314 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 SPATA18Q8TC71 538 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
ABCF1-206ENST00000479542 HVCN1Q96D96 273 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 CNTNAP3BQ96NU0 1288 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 GCNAQ96QF7 691 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 CNTNAP3Q9BZ76 1288 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
ABCF1-206ENST00000479542 NPHP3-ACAD11A0A0J9YXS1 232 aa14.37□□□□□ -0.11
ABCF1-206ENST00000479542 K7ENM7 598 aa14.37□□□□□ -0.11
ABCF1-206ENST00000479542 PPEF2O14830 753 aa14.37□□□□□ -0.11
ABCF1-206ENST00000479542 F11P03951 625 aa14.37□□□□□ -0.11
ABCF1-206ENST00000479542 ATF6P18850 670 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms