RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PDK4Q16654 411 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 TEX9Q8N6V9 391 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 AGBL3Q8NEM8 1001 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 GRK7Q8WTQ7 553 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CCDC77Q9BR77 488 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 UBN1Q9NPG3 1134 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 RNF146Q9NTX7 359 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 STK32BQ9NY57 414 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 WDR91A4D1P6 747 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 ATP5HO75947 161 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CA4P22748 312 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 KLRC2P26717 231 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 OVGP1Q12889 678 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 ALCAMQ13740 583 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CLEC16AQ2KHT3 1053 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 ZBTB41Q5SVQ8 909 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 TMEM154Q6P9G4 183 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 SYDE1Q6ZW31 735 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 APBB1IPQ7Z5R6 666 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 VSIG10LQ86VR7 867 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 DNAJC9Q8WXX5 260 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 ZBTB45Q96K62 511 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 SH3GL3Q99963 347 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 METTL5Q9NRN9 209 aaKnown RBP14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 DCTN4Q9UJW0 460 aa14.06□□□□□ -0.16
PDZRN3-208ENST00000479530 GNAT1P11488 350 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ACOT2P49753 483 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 GHRHRQ02643 423 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CTC1Q2NKJ3 1217 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ATP13A4Q4VNC1 1196 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 SEZ6Q53EL9 994 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 RNF220Q5VTB9 566 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 GSTA5Q7RTV2 222 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 FBXL13Q8NEE6 735 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 LRRC8CQ8TDW0 803 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 PRR11Q96HE9 360 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MAK16Q9BXY0 300 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 HAPLN2Q9GZV7 340 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 TMEM8AQ9HCN3 771 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 NMRK1Q9NWW6 199 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 KANSL3Q9P2N6 904 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 COQ4Q9Y3A0 265 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 PCDHA10Q9Y5I2 948 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 HNRNPDLO14979 420 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 SMIM24O75264 130 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 DCTN3O75935 186 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 FESP07332 822 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 RFC5P40937 340 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 GPC3P51654 580 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MXRA7P84157 204 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 SP2Q02086 613 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MAPK6Q16659 721 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MCOLN2Q8IZK6 566 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ZCCHC9Q8N567 271 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CCDC89Q8N998 374 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 NRG4Q8WWG1 115 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 LPAR1Q92633 364 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MFSD14AQ96MC6 490 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ANKRD27Q96NW4 1050 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 NT5C1BQ96P26 610 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CYLDQ9NQC7 956 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 PRPF4O43172 522 aaKnown RBP eCLIP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 UNGP13051 313 aaPredicted RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 KRT10P13645 584 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 KCNA2P16389 499 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 MTM1Q13496 603 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CLNKQ7Z7G1 428 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 NLRX1Q86UT6 975 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 RELL1Q8IUW5 271 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 PASD1Q8IV76 773 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 RFWD2Q8NHY2 731 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 CADM1Q9BY67 442 aaKnown RBP14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ANKEF1Q9NU02 776 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 DLGAP2Q9P1A6 1054 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 ZFP69BQ9UJL9 534 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 USTQ9Y2C2 406 aa14.05□□□□□ -0.16
PDZRN3-208ENST00000479530 E7ENQ6 273 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 TYROBPO43914 113 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ZBED4O75132 1171 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 TCF4P15884 667 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 PECAM1P16284 738 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 ALDH3A1P30838 453 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 MAN1A1P33908 653 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 EFTUD2Q15029 972 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 MUM1Q2TAK8 710 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 KAZNQ674X7 775 aa14.04□□□□□ -0.16
PDZRN3-208ENST00000479530 CIAPIN1Q6FI81 312 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms