RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMEM191CA6NGB0 347 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 KRT1P04264 644 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 TMEM191BP0C7N4 346 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 KLRC2P26717 231 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 FAM47EQ6ZV65 393 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 KATNAL2Q8IYT4 538 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 TRAIPQ9BWF2 469 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 CYTH4Q9UIA0 394 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 ZNF148Q9UQR1 794 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 DNAH12Q6ZR08 3092 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 IGKV6D-21A0A0A0MT36 114 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 PIK3R2O00459 728 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SPAG7O75391 227 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 ASS1P00966 412 aaKnown RBP11.43□□□□□ -0.58
VPS52-217ENST00000478934 PIGRP01833 764 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 BRAFP15056 766 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 KCNJ2P63252 427 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 LAMTOR4Q0VGL1 99 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SNCBQ16143 134 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 CCNG2Q16589 344 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 EEF1DP3Q658K8 133 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SLFN12LQ6IEE8 588 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 DENND1BQ6P3S1 775 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 TRPM8Q7Z2W7 1104 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 RHPN2Q8IUC4 686 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 EMC1Q8N766 993 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 C3orf20Q8ND61 904 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SGSM3Q96HU1 749 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 FAM81BQ96LP2 452 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 RUNDC3BQ96NL0 473 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SLITRK1Q96PX8 696 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 RBM15Q96T37 977 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS52-217ENST00000478934 TMEM121Q9BTD3 319 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 PARVAQ9NVD7 372 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 A8MUI8 341 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 H0YCG3 227 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 PSTPIP1O43586 416 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 IFNB1P01574 187 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 ICAM3P32942 547 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 BAG6P46379 1132 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 ZNF132P52740 706 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 ELF3P78545 371 aaPredicted RBP11.43□□□□□ -0.58
VPS52-217ENST00000478934 MFSD5Q6N075 450 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 DCUN1D2Q6PH85 259 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 TAOK1Q7L7X3 1001 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 KIAA0319LQ8IZA0 1049 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 UBR7Q8N806 425 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 TRIM11Q96F44 468 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 ZWILCHQ9H900 591 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 MRPL47Q9HD33 250 aaKnown RBP11.43□□□□□ -0.58
VPS52-217ENST00000478934 SAYSD1Q9NPB0 183 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 CNTN6Q9UQ52 1028 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 DOCK1Q14185 1865 aa11.43□□□□□ -0.58
VPS52-217ENST00000478934 LRRD1A4D1F6 860 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ZBTB42B2RXF5 422 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ASAP2O43150 1006 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 LIASO43766 372 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 SNX3O60493 162 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 MAFO75444 373 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 IQCF3P0C7M6 154 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 RFC1P35251 1148 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 ARSEP51690 589 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 GPS1Q13098 491 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 TMED2Q15363 201 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 TAF5Q15542 800 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 LACTB2Q53H82 288 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 RAB6CQ53S08 254 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 GJC2Q5T442 439 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 SYCP2LQ5T4T6 812 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 LBX2Q6XYB7 198 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ARMC9Q7Z3E5 817 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 BRSK2Q8IWQ3 736 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 ARFGAP1Q8N6T3 406 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 EXD1Q8NHP7 514 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS52-217ENST00000478934 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 ACO2Q99798 780 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 RAB6CQ9H0N0 254 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 HMGXB4Q9UGU5 601 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 L3MBTL1Q9Y468 752 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 TCRBV5S1A1TA0A578 114 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 LDHAP00338 332 aaKnown RBP11.42□□□□□ -0.58
VPS52-217ENST00000478934 KRT19P08727 400 aa11.42□□□□□ -0.58
VPS52-217ENST00000478934 CD48P09326 243 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms