RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 CXCL12P48061 93 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 SOX9P48436 509 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 ACOT2P49753 483 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 CDR1P51861 262 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 LMNB2Q03252 620 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 FCHO2Q0JRZ9 810 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 SLC39A12Q504Y0 691 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 LARP1BQ659C4 914 aaKnown RBP14.34□□□□□ -0.11
VCL-205ENST00000478896 SLC39A4Q6P5W5 647 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 GAREM2Q75VX8 874 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 METTL23Q86XA0 190 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 KRI1Q8N9T8 703 aaKnown RBP14.34□□□□□ -0.11
VCL-205ENST00000478896 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 TTC8Q8TAM2 541 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 LRRC15Q8TF66 581 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 RSPRY1Q96DX4 576 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 PYM1Q9BRP8 204 aaKnown RBP14.34□□□□□ -0.11
VCL-205ENST00000478896 DSEQ9UL01 958 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 DERAQ9Y315 318 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.34□□□□□ -0.11
VCL-205ENST00000478896 SPTBN4Q9H254 2564 aa14.34□□□□□ -0.11
VCL-205ENST00000478896 KIF26AQ9ULI4 1882 aaPredicted RBP14.33□□□□□ -0.11
VCL-205ENST00000478896 PIRO00625 290 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 CD2BP2O95400 341 aaKnown RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 ADRB2P07550 413 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 CDC25CP30307 473 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 MCM2P49736 904 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 TAF6P49848 677 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 CYP4F8P98187 520 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 SATB1Q01826 763 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 GRIN1Q05586 938 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 ARHGAP29Q52LW3 1261 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 SLFN12LQ6IEE8 588 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 BRAPQ7Z569 592 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 THEM5Q8N1Q8 247 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 ZFYVE19Q96K21 471 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 ASB7Q9H672 318 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 RBM12Q9NTZ6 932 aaKnown RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 HSFX1Q9UBD0 423 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 AGO2Q9UKV8 859 aaKnown RBP14.33□□□□□ -0.12
VCL-205ENST00000478896 F5P12259 2224 aa14.33□□□□□ -0.12
VCL-205ENST00000478896 PRR5-ARHGAP8B1AHC4 643 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 TISP43B9A030 160 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 ANKRD63C9JTQ0 380 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 SPECC1L-ADORA2AF8WAN1 911 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 CYB561D2O14569 222 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 CYP11A1P05108 521 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 TDGF1P13385 188 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 CTHP32929 405 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 MLLT6P55198 1093 aaPredicted RBP14.32□□□□□ -0.12
VCL-205ENST00000478896 ARHGAP8P85298 464 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 GTF2BQ00403 316 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 RALGPS2Q86X27 583 aaPredicted RBP14.32□□□□□ -0.12
VCL-205ENST00000478896 SPEM1Q8N4L4 309 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 CELF5Q8N6W0 485 aaKnown RBP14.32□□□□□ -0.12
VCL-205ENST00000478896 BPIFB1Q8TDL5 484 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 POMGNT1Q8WZA1 660 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 ZNF560Q96MR9 790 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 FIZ1Q96SL8 496 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 ZCWPW1Q9H0M4 648 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 DPP3Q9NY33 737 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 OBP2AQ9NY56 170 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 ABI2Q9NYB9 513 aaPredicted RBP14.32□□□□□ -0.12
VCL-205ENST00000478896 GTSE1Q9NYZ3 720 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 C2CD2Q9Y426 696 aa14.32□□□□□ -0.12
VCL-205ENST00000478896 ZNF638Q14966 1978 aaKnown RBP14.32□□□□□ -0.12
VCL-205ENST00000478896 ANO9A1A5B4 782 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 MYBPHLA2RUH7 354 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 VPS37CA5D8V6 355 aaPredicted RBP14.31□□□□□ -0.12
VCL-205ENST00000478896 ATF6P18850 670 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 SPEM2Q0P670 501 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 SIM2Q14190 667 aaPredicted RBP14.31□□□□□ -0.12
VCL-205ENST00000478896 GAS6Q14393 721 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 PON2Q15165 354 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 SV2CQ496J9 727 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 DGKKQ5KSL6 1271 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 LAIR1Q6GTX8 287 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 Q6ZS52 159 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 DYMQ7RTS9 669 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.31□□□□□ -0.12
VCL-205ENST00000478896 SFR1Q86XK3 245 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 SPPL2BQ8TCT7 592 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 C2orf15Q8WU43 125 aaKnown RBP14.31□□□□□ -0.12
VCL-205ENST00000478896 MKNK1Q9BUB5 465 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 TASP1Q9H6P5 420 aa14.31□□□□□ -0.12
VCL-205ENST00000478896 THG1LQ9NWX6 298 aaKnown RBP14.31□□□□□ -0.12
VCL-205ENST00000478896 CHURC1-FNTBB4DL54 471 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 PRAMEF12O95522 483 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 DDIT3P35638 169 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 FNTBP49356 437 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 ATXN1P54253 815 aaKnown RBP14.3□□□□□ -0.12
VCL-205ENST00000478896 SMARCB1Q12824 385 aa14.3□□□□□ -0.12
VCL-205ENST00000478896 POSTNQ15063 836 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms