RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 USP25Q9UHP3 1055 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 SLC27A5Q9Y2P5 690 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 NCANO14594 1321 aa20.24■□□□□ 0.83
SREBF1-212ENST00000478616 PRRG1O14668 218 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 PAX3P23760 479 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 SNW1Q13573 536 aaKnown RBP20.23■□□□□ 0.83
SREBF1-212ENST00000478616 BECN1Q14457 450 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 USP37Q86T82 979 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 PDCL2Q8N4E4 241 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 CSGALNACT2Q8N6G5 542 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 ENGASEQ8NFI3 743 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 MFSD14AQ96MC6 490 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 GDAP2Q9NXN4 497 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 MAFFQ9ULX9 164 aa20.23■□□□□ 0.83
SREBF1-212ENST00000478616 ZNF202O95125 648 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 CST3P01034 146 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 LRG1P02750 347 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 RPN1P04843 607 aaKnown RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 PTPN2P17706 415 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 FCARP24071 287 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 ELF1P32519 619 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 CASP4P49662 377 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 PSMD6Q15008 389 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 SV2CQ496J9 727 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 CWF19L1Q69YN2 538 aaKnown RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 FMR1NBQ8N0W7 255 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 LRRC52Q8N7C0 313 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 TMEM174Q8WUU8 243 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 ZSWIM3Q96MP5 696 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 CORO1BQ9BR76 489 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 OXCT2Q9BYC2 517 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 PLA2G2FQ9BZM2 168 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 ITGA11Q9UKX5 1188 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 ATP6V1DQ9Y5K8 247 aa20.22■□□□□ 0.83
SREBF1-212ENST00000478616 NUP210Q8TEM1 1887 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-212ENST00000478616 CACNA1HO95180 2353 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 KRBA1A5PL33 1030 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 RHOBTB3O94955 611 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 GJA1P17302 382 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 ATF6P18850 670 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 SNRPFP62306 86 aaKnown RBP20.21■□□□□ 0.83
SREBF1-212ENST00000478616 SOWAHAQ2M3V2 549 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 WDR49Q8IV35 697 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 PRSS33Q8NF86 280 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 MCRS1Q96EZ8 462 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 ZNF560Q96MR9 790 aa20.21■□□□□ 0.83
SREBF1-212ENST00000478616 ZNF334Q9HCZ1 680 aaPredicted RBP20.21■□□□□ 0.83
SREBF1-212ENST00000478616 KIF26AQ9ULI4 1882 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-212ENST00000478616 ANAPC1Q9H1A4 1944 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 GABRDO14764 452 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 BFSP1Q12934 665 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 PSMD2Q13200 908 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 SLC39A12Q504Y0 691 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 C1orf220Q5T0J3 134 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 TRAPPC11Q7Z392 1133 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 TMEM105Q8N8V8 129 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 SHKBP1Q8TBC3 707 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
SREBF1-212ENST00000478616 CGRRF1Q99675 332 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 MKNK1Q9BUB5 465 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 KIAA1586Q9HCI6 787 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 EXOC1Q9NV70 894 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 DSEQ9UL01 958 aa20.2■□□□□ 0.82
SREBF1-212ENST00000478616 MRPS23Q9Y3D9 190 aaKnown RBP20.2■□□□□ 0.82
SREBF1-212ENST00000478616 ARIH1Q9Y4X5 557 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-212ENST00000478616 ZFP37Q9Y6Q3 630 aaPredicted RBP20.2■□□□□ 0.82
SREBF1-212ENST00000478616 MYL1P05976 194 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 AVPR2P30518 371 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 PNPLA4P41247 253 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 CLDN10P78369 228 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 NUCB2P80303 420 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 RBP5P82980 135 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 SLC9A9Q8IVB4 645 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 NXPE3Q969Y0 559 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 CCDC127Q96BQ5 260 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 XYLT2Q9H1B5 865 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 SNX9Q9Y5X1 595 aa20.19■□□□□ 0.82
SREBF1-212ENST00000478616 SHISA7A6NL88 538 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 PI15O43692 258 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 CFHP08603 1231 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 KRT19P08727 400 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 SRFP11831 508 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 ACAT1P24752 427 aaKnown RBP20.18■□□□□ 0.82
SREBF1-212ENST00000478616 DLG4P78352 724 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 SURF1Q15526 300 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 TANGO2Q6ICL3 276 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 GAREM2Q75VX8 874 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 HS2ST1Q7LGA3 356 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 GPR152Q8TDT2 470 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 PARD3BQ8TEW8 1205 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 ELMO3Q96BJ8 720 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 RSPRY1Q96DX4 576 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 ANKRD36BP1Q96IX9 119 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 KXD1Q9BQD3 176 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 LPIN3Q9BQK8 851 aa20.18■□□□□ 0.82
SREBF1-212ENST00000478616 IL21Q9HBE4 155 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms