RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PMEPA1Q969W9 287 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 MS4A14Q96JA4 679 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 FAM84AQ96KN4 292 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 HHIPQ96QV1 700 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 RIT2Q99578 217 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 MXRA8Q9BRK3 442 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 ZNF577Q9BSK1 485 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 TIPINQ9BVW5 301 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 PACSIN1Q9BY11 444 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 STK33Q9BYT3 514 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 VPS33BQ9H267 617 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 UNC45AQ9H3U1 944 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 CCSER2Q9H7U1 834 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 DMAC2Q9NW81 257 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 GOLGA6AQ9NYA3 693 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 MAP3K20Q9NYL2 800 aaKnown RBP5.33□□□□□ -1.56
SF3B6-202ENST00000478050 SMARCAL1Q9NZC9 954 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 EHD2Q9NZN4 543 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 SUCLA2Q9P2R7 463 aaPredicted RBP5.33□□□□□ -1.56
SF3B6-202ENST00000478050 TMEM59LQ9UK28 342 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 DIS3Q9Y2L1 958 aaKnown RBP5.33□□□□□ -1.56
SF3B6-202ENST00000478050 FRMD4BQ9Y2L6 1034 aa5.33□□□□□ -1.56
SF3B6-202ENST00000478050 DOCK5Q9H7D0 1870 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SIP14410 1827 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 PHIPQ8WWQ0 1821 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RPTORQ8N122 1335 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CLRN2A0PK11 232 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 A6NHS1 94 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 F8VZ95 297 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 TULP2O00295 520 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 IPO5O00410 1097 aaKnown RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 DDX3XO00571 662 aaKnown RBP eCLIP5.32□□□□□ -1.566e-8■■□□□ 12.9
SF3B6-202ENST00000478050 MAPK13O15264 365 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CHMP2AO43633 222 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CEP104O60308 925 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 PPFIA4O75335 1185 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LYPLA2O95372 231 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ICAM1P05362 532 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ASNSP08243 561 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 TMEM253P0C7T8 217 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ARP10275 920 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 KRT13P13646 458 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CAP2P40123 477 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CYP2J2P51589 502 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 HSD17B4P51659 736 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 GALCP54803 685 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 GUCY2DQ02846 1103 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CETN1Q12798 172 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 BFSP1Q12934 665 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 DRAP1Q14919 205 aaPredicted RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 KIAA1755Q5JYT7 1200 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ODR4Q5SWX8 454 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RGMBQ6NW40 437 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LRIG3Q6UXM1 1119 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LRRC31Q6UY01 552 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 PEX26Q7Z412 305 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 MCF2L2Q86YR7 1114 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CD302Q8IX05 232 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RTKN2Q8IZC4 609 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SYCP3Q8IZU3 236 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RASGEF1CQ8N431 466 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 C1orf127Q8N9H9 656 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CCDC26Q8TAB7 109 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LNX1Q8TBB1 728 aaPredicted RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SCFD2Q8WU76 684 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CASKIN2Q8WXE0 1202 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CTNNBL1Q8WYA6 563 aaPredicted RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 RFFLQ8WZ73 363 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 NXPE3Q969Y0 559 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 MISP3Q96FF7 219 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 GDAP1L1Q96MZ0 367 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ACCSQ96QU6 501 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 FIZ1Q96SL8 496 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 IWS1Q96ST2 819 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 GMLQ99445 158 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 KRT12Q99456 494 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 PSMD1Q99460 953 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 OSMRQ99650 979 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LXNQ9BS40 222 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 STRA6Q9BX79 667 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 FAM107BQ9H098 131 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 ISCUQ9H1K1 167 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SLITRK6Q9H5Y7 841 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 TMEM206Q9H813 350 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 CAPN10Q9HC96 672 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 EPB41L5Q9HCM4 733 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 AGPAT3Q9NRZ7 376 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 GINM1Q9NU53 330 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 LARSQ9P2J5 1176 aaKnown RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 APEX2Q9UBZ4 518 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 DBR1Q9UK59 544 aaKnown RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 DNAJC12Q9UKB3 198 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 AJAP1Q9UKB5 411 aaPredicted RBP5.32□□□□□ -1.56
SF3B6-202ENST00000478050 AMFRQ9UKV5 643 aa5.32□□□□□ -1.56
SF3B6-202ENST00000478050 NOC2LQ9Y3T9 749 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms