RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 NAIF1Q69YI7 327 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ZNF280DQ6N043 979 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PPP4R3CPQ6ZMV5 832 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 GAREM2Q75VX8 874 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 LPCAT2Q7L5N7 544 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 TTC30AQ86WT1 665 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ZNF843Q8N446 348 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 DAGLBQ8NCG7 672 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 CCDC148Q8NFR7 591 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ZNF274Q96GC6 653 aaPredicted RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 DYDC2Q96IM9 177 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 FAM83CQ9BQN1 747 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 ADPGKQ9BRR6 497 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 RGL1Q9NZL6 768 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 VAV3Q9UKW4 847 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 MAFFQ9ULX9 164 aa10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 TNRC6BQ9UPQ9 1833 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 URB1O60287 2271 aaKnown RBP10.63□□□□□ -0.71
SMARCB1-206ENST00000477836 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 A0A087WV48 116 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 PODXLO00592 558 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 SH3BP5O60239 455 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 CD59P13987 128 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 ALDH1A3P47895 512 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 CYP4F8P98187 520 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 CYP4A11Q02928 519 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 GFPT1Q06210 699 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 SOX4Q06945 474 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 CYP4F3Q08477 520 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 ST3GAL1Q11201 340 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 SCRN1Q12765 414 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 RASSF3Q86WH2 238 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 MINDY1Q8N5J2 469 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 MDGA1Q8NFP4 955 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 OR2I1PQ8NGU4 316 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 PIP4K2CQ8TBX8 421 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 RLN3Q8WXF3 142 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 EZH1Q92800 747 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 CNOT6LQ96LI5 555 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 HNRNPABQ99729 332 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 POLR3FQ9H1D9 316 aaPredicted RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 ZSWIM4Q9H7M6 989 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 VPS54Q9P1Q0 977 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 DDX25Q9UHL0 483 aaKnown RBP10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 SLC6A14Q9UN76 642 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 USP20Q9Y2K6 914 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
SMARCB1-206ENST00000477836 MYO16Q9Y6X6 1858 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 TRIP11Q15643 1979 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 KIAA1549LQ6ZVL6 1849 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 CPLX1O14810 134 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 ARHGAP6O43182 974 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 PRPF3O43395 683 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 SLC37A4O43826 429 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 DGAT1O75907 488 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 ARSAP15289 507 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 LIG1P18858 919 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 ITPKAP23677 461 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 ABCG1P45844 678 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 CCT2P78371 535 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 DUSP4Q13115 394 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 EPHA7Q15375 998 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 LYSMD4Q5XG99 296 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 NCAPH2Q6IBW4 605 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 CPLX2Q6PUV4 134 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 DNAJB7Q7Z6W7 309 aaPredicted RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 ZBTB8OSQ8IWT0 167 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 TPH2Q8IWU9 490 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 FRMD1Q8N878 549 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 EXOC4Q96A65 974 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 DCBLD2Q96PD2 775 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 FNBP1Q96RU3 617 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 CRISPLD1Q9H336 500 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 FZD8Q9H461 694 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 TASP1Q9H6P5 420 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 NCOA5Q9HCD5 579 aaKnown RBP10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 DKK4Q9UBT3 224 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 PILRBQ9UKJ0 227 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 PI4KAP42356 2102 aa10.61□□□□□ -0.71
SMARCB1-206ENST00000477836 PTPRBP23467 1997 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CCDC196A0A1B0GTZ2 297 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 SMIM28A0A1B0GU29 152 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 CDKL5O76039 1030 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 VNN2O95498 520 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 FGF19O95750 216 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 OR4Q2P0C623 313 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 WEE1P30291 646 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 GJA4P35212 333 aa10.6□□□□□ -0.71
SMARCB1-206ENST00000477836 DPP6P42658 865 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms