RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MMP13P45452 471 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 PHKA2P46019 1235 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 MRPS9P82933 396 aaKnown RBP10.3□□□□□ -0.76
CMC1-209ENST00000477739 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
CMC1-209ENST00000477739 DARS2Q6PI48 645 aaKnown RBP10.3□□□□□ -0.76
CMC1-209ENST00000477739 NPNTQ6UXI9 565 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 FAM83AQ86UY5 434 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 KCTD6Q8NC69 237 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 ATL2Q8NHH9 583 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 PARD3BQ8TEW8 1205 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 ADAM7Q9H2U9 754 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
CMC1-209ENST00000477739 NKX1-2Q9UD57 310 aaPredicted RBP10.3□□□□□ -0.76
CMC1-209ENST00000477739 AGO2Q9UKV8 859 aaKnown RBP10.3□□□□□ -0.76
CMC1-209ENST00000477739 SYNPO2Q9UMS6 1093 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
CMC1-209ENST00000477739 GYG2O15488 501 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 STAM2O75886 525 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 JAK3P52333 1124 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 WNT7BP56706 349 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 KRT76Q01546 638 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 SPARCL1Q14515 664 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PGM5Q15124 567 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 SLC1A5Q15758 541 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PREPLQ4J6C6 727 aaPredicted RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 THEMIS2Q5TEJ8 643 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CEP120Q8N960 986 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 AGBL3Q8NEM8 1001 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ATP6V0A1Q93050 837 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PDCD2LQ9BRP1 358 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 SMYD2Q9NRG4 433 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 DLGAP2Q9P1A6 1054 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PIM2Q9P1W9 311 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PCDHA10Q9Y5I2 948 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 A0A0A6YYK5 440 aaPredicted RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 TOP3BO95985 862 aaKnown RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 MT-ND3P03897 115 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 NR3C2P08235 984 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 TMEM191BP0C7N4 346 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 MUTP22033 750 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 TNFSF9P41273 254 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 Q3C1V9 767 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CFAP157Q5JU67 520 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ANKRD20A2Q5SQ80 823 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ANKRD20A1Q5TYW2 823 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ACAD10Q6JQN1 1059 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 C6orf89Q6UWU4 347 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 TTC7BQ86TV6 843 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 RASGEF1CQ8N431 466 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 DCLK2Q8N568 766 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ACAP3Q96P50 834 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ZNF317Q96PQ6 595 aaPredicted RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 FIZ1Q96SL8 496 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 TRAIPQ9BWF2 469 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 GEMIN8Q9NWZ8 242 aaKnown RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 BTNL10A8MVZ5 291 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CDH16O75309 829 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 INHBAP08476 426 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CCND2P30279 289 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 GBP1P32455 592 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 GMPRP36959 345 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PTGER2P43116 358 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CRADDP78560 199 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PRKCEQ02156 737 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 TAF5Q15542 800 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 NBPF12Q5TAG4 269 aaPredicted RBP10.29□□□□□ -0.76
CMC1-209ENST00000477739 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 ANKS1BQ7Z6G8 1248 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 RSPH3Q86UC2 560 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 POU5F2Q8N7G0 328 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CCDC110Q8TBZ0 833 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 USP6NLQ92738 828 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CLPTM1LQ96KA5 538 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 DEFB129Q9H1M3 183 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 PRM3Q9NNZ6 103 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 SLC17A7Q9P2U7 560 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 HEY2Q9UBP5 337 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CDK5RAP2Q96SN8 1893 aa10.29□□□□□ -0.76
CMC1-209ENST00000477739 CNTNAP1P78357 1384 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 H3BRJ5 948 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 CCNE2O96020 404 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 EGFRP00533 1210 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 APRTP07741 180 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 RASSF2P50749 326 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 ARMC3Q5W041 872 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 SLFN11Q7Z7L1 901 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 DCLK3Q9C098 648 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 DMAC2Q9NW81 257 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 STK10O94804 968 aaKnown RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 CD48P09326 243 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 ESRRAP11474 423 aaPredicted RBP10.28□□□□□ -0.76
CMC1-209ENST00000477739 BGNP21810 368 aa10.28□□□□□ -0.76
CMC1-209ENST00000477739 HSD17B4P51659 736 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms