RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 GPD1P21695 349 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 IBSPP21815 317 aaPredicted RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 ANXA11P50995 505 aaKnown RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 PSMC1P62191 440 aaKnown RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 PCBP2Q15366 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBR3-209ENST00000477461 KHDC1Q4VXA5 237 aaKnown RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 PAPD7Q5XG87 772 aaKnown RBP5.35□□□□□ -1.55
UBR3-209ENST00000477461 TAPT1Q6NXT6 567 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 RASAL3Q86YV0 1011 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 B3GALNT2Q8NCR0 500 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 PGBD1Q96JS3 809 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 MRGPRX4Q96LA9 322 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 HAPLN3Q96S86 360 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 DMRTA2Q96SC8 542 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 ENTPD2Q9Y5L3 495 aa5.35□□□□□ -1.55
UBR3-209ENST00000477461 EFCAB5A4FU69 1503 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 PRG4Q92954 1404 aaPredicted RBP5.34□□□□□ -1.55
UBR3-209ENST00000477461 F5H697 171 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 INO80B-WBP1J3KQ70 363 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 PROP1O75360 226 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 PHKA1P46020 1223 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 TLE1Q04724 770 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 ITKQ08881 620 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 PTPRRQ15256 657 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 TXNRD1Q16881 649 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 EPHA10Q5JZY3 1008 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 ZNF365Q70YC5 407 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 GPATCH3Q96I76 525 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 TRIB1Q96RU8 372 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 INO80BQ9C086 356 aaPredicted RBP5.34□□□□□ -1.55
UBR3-209ENST00000477461 SLAMF7Q9NQ25 335 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 ADAM21Q9UKJ8 722 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
UBR3-209ENST00000477461 SHROOM2Q13796 1616 aa5.34□□□□□ -1.56
UBR3-209ENST00000477461 COL3A1P02461 1466 aaPredicted RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 TTBK1Q5TCY1 1321 aaPredicted RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 CCDC151A5D8V7 595 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 CGB1A6NKQ9 187 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 E9PLN8 166 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 PROM1O43490 865 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 RHOP08100 348 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 FAM50AQ14320 339 aaKnown RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 UAP1L1Q3KQV9 507 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 TMEM119Q4V9L6 283 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 MICALCLQ6ZW33 695 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 PRPF38AQ8NAV1 312 aaKnown RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 COA7Q96BR5 231 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 TIMP4Q99727 224 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 SMOQ99835 787 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 VKORC1Q9BQB6 163 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 SMOC2Q9H3U7 446 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 MRPS18AQ9NVS2 196 aaKnown RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.33□□□□□ -1.56
UBR3-209ENST00000477461 SERPINB13Q9UIV8 391 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 NEU2Q9Y3R4 380 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 KIAA0556O60303 1618 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 SAMD9Q5K651 1589 aa5.33□□□□□ -1.56
UBR3-209ENST00000477461 ARHGAP35Q9NRY4 1499 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 WDR91A4D1P6 747 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 LRRC14BA6NHZ5 514 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 POLRMTO00411 1230 aaKnown RBP5.32□□□□□ -1.56
UBR3-209ENST00000477461 VPS4BO75351 444 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 NR2F6P10588 404 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 CHRM3P20309 590 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 NPTX2P47972 431 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
UBR3-209ENST00000477461 PIGFQ07326 219 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 SNAPC2Q13487 334 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 RAB39AQ14964 217 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 CAMKK1Q8N5S9 505 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 SSH1Q8WYL5 1049 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 DPF1Q92782 380 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 MTMR8Q96EF0 704 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 TEKT5Q96M29 485 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 TPSD1Q9BZJ3 242 aa5.32□□□□□ -1.56
UBR3-209ENST00000477461 TYW1Q9NV66 732 aaKnown RBP5.32□□□□□ -1.56
UBR3-209ENST00000477461 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.32□□□□□ -1.56
UBR3-209ENST00000477461 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
UBR3-209ENST00000477461 FHOD3Q2V2M9 1422 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 ADGRA2Q96PE1 1338 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 F2RL2O00254 374 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 SGTAO43765 313 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 KATNA1O75449 491 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 MALP21145 153 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 ZNF81P51508 661 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 GUCY2FP51841 1108 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 EVA1CP58658 441 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 MTMR1Q13613 665 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 NBPF8Q3BBV2 869 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 FAM153CQ494X1 144 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 CCDC93Q567U6 631 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 SYDE2Q5VT97 1194 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 PPP4R3AQ6IN85 833 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
UBR3-209ENST00000477461 SARAFQ96BY9 339 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 KLC4Q9NSK0 619 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 CALCOCO1Q9P1Z2 691 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 DKK3Q9UBP4 350 aa5.31□□□□□ -1.56
UBR3-209ENST00000477461 MRFAP1Q9Y605 127 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms