RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 N4BP1O75113 896 aaKnown RBP18.06■□□□□ 0.48
EPHB4-204ENST00000477446 ATICP31939 592 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 MYO1EQ12965 1108 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 GPM6BQ13491 265 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 SV2CQ496J9 727 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 TAS1R1Q7RTX1 841 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 RNF168Q8IYW5 571 aaPredicted RBP18.06■□□□□ 0.48
EPHB4-204ENST00000477446 SPPL3Q8TCT6 385 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 ELMO3Q96BJ8 720 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 RAB20Q9NX57 234 aa18.06■□□□□ 0.48
EPHB4-204ENST00000477446 VWA8A3KMH1 1905 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 EIF3CLB5ME19 914 aaKnown RBP18.05■□□□□ 0.48
EPHB4-204ENST00000477446 GRM6O15303 877 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 P4HA2O15460 535 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 DNAJB1P25685 340 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 TUBB4BP68371 445 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 SGSM1Q2NKQ1 1148 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 WDR59Q6PJI9 974 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 NEK11Q8NG66 645 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 SUSD3Q96L08 255 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 SENP8Q96LD8 212 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 EIF3CQ99613 913 aaKnown RBP18.05■□□□□ 0.48
EPHB4-204ENST00000477446 CHP1Q99653 195 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
EPHB4-204ENST00000477446 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 CDH23Q9H251 3354 aa18.05■□□□□ 0.48
EPHB4-204ENST00000477446 M0QZQ0 153 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 RFXAPO00287 272 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 STAU1O95793 577 aaKnown RBP18.04■□□□□ 0.48
EPHB4-204ENST00000477446 PAX3P23760 479 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 ELAVL2Q12926 359 aaKnown RBP18.04■□□□□ 0.48
EPHB4-204ENST00000477446 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 WDR72Q3MJ13 1102 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 FAM171A1Q5VUB5 890 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 DSTYKQ6XUX3 929 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 VPS52Q8N1B4 723 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 EHBP1Q8NDI1 1231 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 GDPD5Q8WTR4 605 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 POF1BQ8WVV4 589 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 SYN2Q92777 582 aaPredicted RBP18.04■□□□□ 0.48
EPHB4-204ENST00000477446 B3GALT6Q96L58 329 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 VRTNQ9H8Y1 702 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 LZTFL1Q9NQ48 299 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.04■□□□□ 0.484e-6■■■■■ 33.6
EPHB4-204ENST00000477446 COL4A4P53420 1690 aaPredicted RBP18.04■□□□□ 0.48
EPHB4-204ENST00000477446 MYO9BQ13459 2157 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 ASS1P00966 412 aaKnown RBP18.04■□□□□ 0.48
EPHB4-204ENST00000477446 SOD2P04179 222 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 UBE3AQ05086 875 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 CETN1Q12798 172 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 CAMK1Q14012 370 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 ZNF697Q5TEC3 545 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 SPOPLQ6IQ16 392 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 MNS1Q8NEH6 495 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 LMO3Q8TAP4 145 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 TAF4BQ92750 862 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 WDR24Q96S15 920 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 GDAP2Q9NXN4 497 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 STK39Q9UEW8 545 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 SNX9Q9Y5X1 595 aa18.04■□□□□ 0.48
EPHB4-204ENST00000477446 CYB561D2O14569 222 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 CLSTN1O94985 981 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 FGFR3P22607 806 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 TKTP29401 623 aaKnown RBP18.03■□□□□ 0.48
EPHB4-204ENST00000477446 GRIN2CQ14957 1233 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 USP41Q3LFD5 358 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 ACRBPQ8NEB7 543 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 TSC1Q92574 1164 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 CRACR2AQ9BSW2 395 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 HERC2P3Q9BVR0 1158 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 IMPG2Q9BZV3 1241 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
EPHB4-204ENST00000477446 APOBEC3GQ9HC16 384 aaKnown RBP18.03■□□□□ 0.48
EPHB4-204ENST00000477446 CHST7Q9NS84 486 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
EPHB4-204ENST00000477446 PCDHB8Q9UN66 801 aa18.03■□□□□ 0.48
EPHB4-204ENST00000477446 GTPBP10A4D1E9 387 aaKnown RBP18.02■□□□□ 0.48
EPHB4-204ENST00000477446 EFCAB8A8MWE9 144 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 LPXNO60711 386 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 ERVFC1P60507 584 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 NOP14P78316 857 aaKnown RBP18.02■□□□□ 0.48
EPHB4-204ENST00000477446 ZNF667Q5HYK9 610 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 ZNF569Q5MCW4 686 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 RTP2Q5QGT7 225 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 GBP6Q6ZN66 633 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 CCDC42Q96M95 316 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 FAM161BQ96MY7 647 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 TTPALQ9BTX7 342 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 TSGA10Q9BZW7 698 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 ZBP1Q9H171 429 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 PRDM12Q9H4Q4 367 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 TLR9Q9NR96 1032 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 GCNT4Q9P109 453 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 CEP72Q9P209 647 aa18.02■□□□□ 0.48
EPHB4-204ENST00000477446 POLIQ9UNA4 740 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms