RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
COL4A6-206ENST00000477085 RSAD1Q9HA92 442 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 GDAP2Q9NXN4 497 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 MKI67P46013 3256 aaKnown RBP15.39■□□□□ 0.05
COL4A6-206ENST00000477085 XPOTO43592 962 aaKnown RBP15.39■□□□□ 0.05
COL4A6-206ENST00000477085 POMCP01189 267 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 CLCNKBP51801 687 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 BFSP2Q13515 415 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 TRIM60Q495X7 471 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 MON1BQ7L1V2 547 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 PHLDB2Q86SQ0 1253 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 DBF4BQ8NFT6 615 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 ALS2CR12Q96Q35 445 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 LPIN3Q9BQK8 851 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 CYTH4Q9UIA0 394 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 PCDHGC3Q9UN70 934 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF185O15231 689 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 BUB1BO60566 1050 aaPredicted RBP15.38■□□□□ 0.05
COL4A6-206ENST00000477085 TAF6P49848 677 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 TLE2Q04725 743 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 PLEKHG4Q58EX7 1191 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 TRIM72Q6ZMU5 477 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 SLC24A5Q71RS6 500 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 C12orf29Q8N999 325 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 RPS6KC1Q96S38 1066 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 WNT8AQ9H1J5 351 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 PDCL3Q9H2J4 239 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 ABCB6Q9NP58 842 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 CDC23Q9UJX2 597 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 L1RE1Q9UN81 338 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 PACSIN2Q9UNF0 486 aaPredicted RBP15.38■□□□□ 0.05
COL4A6-206ENST00000477085 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
COL4A6-206ENST00000477085 ENPP3O14638 875 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 CD19P15391 556 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 RRM1P23921 792 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 LMO2P25791 158 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 CDH5P33151 784 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 GJA8P48165 433 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 TERF1P54274 439 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 HADHBP55084 474 aaKnown RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 PTPROQ16827 1216 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 CD300LGQ6UXG3 332 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 PHF13Q86YI8 300 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 C1orf131Q8NDD1 294 aaKnown RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF653Q96CK0 615 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 SCLYQ96I15 445 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 CARD6Q9BX69 1037 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 DPEP3Q9H4B8 488 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 FAM124BQ9H5Z6 455 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-206ENST00000477085 SLC38A7Q9NVC3 462 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 GTF3C4Q9UKN8 822 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 SNX12Q9UMY4 172 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 HYOU1Q9Y4L1 999 aa15.37■□□□□ 0.05
COL4A6-206ENST00000477085 CASTOR2A6NHX0 329 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 INPPL1O15357 1258 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 B4GALT3O60512 393 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 MTA2O94776 668 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 SKIP12755 728 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 PNPLA4P41247 253 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 NSFP46459 744 aaKnown RBP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CCL23P55773 120 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 UPP1Q16831 310 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CLLU1OSQ5K130 101 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 C1orf53Q5VUE5 145 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 MMS22LQ6ZRQ5 1243 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 COG1Q8WTW3 980 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 TSC1Q92574 1164 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 BTBD6Q96KE9 485 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 ZNF560Q96MR9 790 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 C11orf70Q9BRQ4 267 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 NT5C1AQ9BXI3 368 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CTTNBP2NLQ9P2B4 639 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 SAR1BQ9Y6B6 198 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 O00370 1275 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 PODXLO00592 558 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 MICAL2O94851 1124 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 EOMESO95936 686 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 VDRP11473 427 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 MMP8P22894 467 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CXCR5P32302 372 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CYP2C18P33260 490 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 GTF2F1P35269 517 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CNGA2Q16280 664 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 SV2CQ496J9 727 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 ACOT1Q86TX2 421 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 NT5DC3Q86UY8 548 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 OSTM1Q86WC4 334 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 CPNE8Q86YQ8 564 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 RHOT2Q8IXI1 618 aa15.36■□□□□ 0.05
COL4A6-206ENST00000477085 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms