RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
VARS2-207ENST00000476162 TMEM192Q8IY95 271 aa16.94■□□□□ 0.3
VARS2-207ENST00000476162 XYLT2Q9H1B5 865 aa16.94■□□□□ 0.3
VARS2-207ENST00000476162 CAND2O75155 1236 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 CALCOCO2Q13137 446 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ARMCX2Q7L311 632 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 CDT1Q9H211 546 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ERAP1Q9NZ08 941 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ASB14A6NK59 587 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 NDUFAB1O14561 156 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 TP73O15350 636 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 B4GALT4O60513 344 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 CSDE1O75534 798 aaKnown RBP16.93■□□□□ 0.3
VARS2-207ENST00000476162 TNNC2P02585 160 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 CXCL8P10145 99 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
VARS2-207ENST00000476162 FGFR4P22455 802 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ASPAP45381 313 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 GRIK3Q13003 919 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
VARS2-207ENST00000476162 PTGISQ16647 500 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ANKS1BQ7Z6G8 1248 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 KATNAL2Q8IYT4 538 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
VARS2-207ENST00000476162 TFAP2BQ92481 460 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ANKRD36BP1Q96IX9 119 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 EPN3Q9H201 632 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 ASIC3Q9UHC3 531 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 IP6K2Q9UHH9 426 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 SLC12A6Q9UHW9 1150 aa16.93■□□□□ 0.3
VARS2-207ENST00000476162 TMEM191CA6NGB0 347 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 C22orf31O95567 290 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 RARGP13631 454 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 SLMAPQ14BN4 828 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TRIP13Q15645 432 aaPredicted RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 HOOK3Q86VS8 718 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 WDTC1Q8N5D0 677 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TMEM35BQ8NCS4 154 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 UHMK1Q8TAS1 419 aaKnown RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 PPP1R16BQ96T49 567 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 FAM118BQ9BPY3 351 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 OSBPL8Q9BZF1 889 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 NXF1Q9UBU9 619 aaKnown RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 TNFSF13BQ9Y275 285 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 GPR25O00155 361 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 ASAP2O43150 1006 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 LSM8O95777 96 aaKnown RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 CALB1P05937 261 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 KRT19P08727 400 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 INSRRP14616 1297 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TCF4P15884 667 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TMOD1P28289 359 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 SEC24CP53992 1094 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 ATP13A4Q4VNC1 1196 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 CCDC25Q86WR0 208 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TMEM130Q8N3G9 435 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 CCDC114Q96M63 670 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 IFT122Q9HBG6 1241 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 WHRNQ9P202 907 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 DDX20Q9UHI6 824 aaKnown RBP16.92■□□□□ 0.3
VARS2-207ENST00000476162 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
VARS2-207ENST00000476162 TCRBV5S1A1TA0A578 114 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 ANKRD33BA6NCL7 494 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 IVDP26440 423 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 MAN1A1P33908 653 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 ACTN3Q08043 901 aaPredicted RBP16.91■□□□□ 0.3
VARS2-207ENST00000476162 ZNF252P-AS1Q0IIN9 211 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 SHCBP1Q8NEM2 672 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 ATL2Q8NHH9 583 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 EXD1Q8NHP7 514 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 TLCD1Q96CP7 247 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 MCEEQ96PE7 176 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
VARS2-207ENST00000476162 SMIM23A6NLE4 172 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 RIPK2O43353 540 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 LGALS2P05162 132 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 ITIH2P19823 946 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 RAP1GAPP47736 663 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 PTK6Q13882 451 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 EAPPQ56P03 285 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 TAPT1Q6NXT6 567 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 DNAJC24Q6P3W2 148 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 FAM43BQ6ZT52 329 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 SYDE1Q6ZW31 735 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 GRK7Q8WTQ7 553 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 EVPLQ92817 2033 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 A0A087WZ62 844 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 F8VP50 259 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 GAS8O95995 478 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms