RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 ELAVL2Q12926 359 aaKnown RBP7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ELOA3BQ3SY89 546 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 COLEC12Q5KU26 742 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 UBXN11Q5T124 520 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 NIPA1Q7RTP0 329 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 CATSPER4Q7RTX7 472 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 SYT12Q8IV01 421 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 LEMD2Q8NC56 503 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ELOA3Q8NG57 546 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ZSCAN18Q8TBC5 510 aaPredicted RBP7.18□□□□□ -1.26
COL11A1-209ENST00000475980 PIGKQ92643 395 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 TCEAL4Q96EI5 215 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ZNF668Q96K58 619 aaPredicted RBP7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ZSWIM3Q96MP5 696 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 HHIPQ96QV1 700 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 UBAC1Q9BSL1 405 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ZBTB40Q9NUA8 1239 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ZSWIM5Q9P217 1185 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 MBD1Q9UIS9 605 aaPredicted RBP7.18□□□□□ -1.26
COL11A1-209ENST00000475980 ITPR2Q14571 2701 aa7.18□□□□□ -1.26
COL11A1-209ENST00000475980 A0A087WZ62 844 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 IGKV6-21A0A0C4DH24 114 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 ADAM12O43184 909 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 MOSPD3O75425 235 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 SMARCA1P28370 1054 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 HOXA11P31270 313 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 MLH1P40692 756 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 CCR2P41597 374 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 CCR10P46092 362 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 SCNN1GP51170 649 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 PLCB2Q00722 1185 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 GRIK3Q13003 919 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 MCMDC2Q4G0Z9 681 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 ARHGAP29Q52LW3 1261 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 USP39Q53GS9 565 aaKnown RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 ZNF468Q5VIY5 522 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 PDZD4Q76G19 769 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 GPR155Q7Z3F1 870 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 YAF2Q8IY57 180 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 DAGLBQ8NCG7 672 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 SMG8Q8ND04 991 aaKnown RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 CEP76Q8TAP6 659 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 GAD1Q99259 594 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 KIF2CQ99661 725 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 FDXACB1Q9BRP7 624 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 SPZ1Q9BXG8 430 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 ZCCHC2Q9C0B9 1178 aaKnown RBP7.17□□□□□ -1.26
COL11A1-209ENST00000475980 PSTPIP2Q9H939 334 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 CAPN10Q9HC96 672 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 OBP2AQ9NY56 170 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 MTRRQ9UBK8 725 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 PCDHA6Q9UN73 950 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 PCDHA8Q9Y5H6 950 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 SALL3Q9BXA9 1300 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 ZFHX3Q15911 3703 aa7.17□□□□□ -1.26
COL11A1-209ENST00000475980 TRABD2BA6NFA1 517 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 M0R082 166 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 TRDMT1O14717 391 aaKnown RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ZNF213O14771 459 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 TADA2AO75478 443 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GJB3O75712 270 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 LRG1P02750 347 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GP1BBP13224 206 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ITGA4P13612 1032 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CD33P20138 364 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ITPKBP27987 946 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 OR1D2P34982 312 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 EIF2S3P41091 472 aaKnown RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ATXN3P54252 364 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GP2P55259 537 aaKnown RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 RIPPLY3P57055 190 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CENPCQ03188 943 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GRSF1Q12849 480 aaKnown RBP eCLIP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 DRP2Q13474 957 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 TARBP2Q15633 366 aaKnown RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 FBXO43Q4G163 708 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CYP4A22Q5TCH4 519 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 FAM171A1Q5VUB5 890 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 FSTL4Q6MZW2 842 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 LRRC69Q6ZNQ3 347 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 HAUS6Q7Z4H7 955 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 RABEPKQ7Z6M1 372 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 RASSF3Q86WH2 238 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GALNT15Q8N3T1 639 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 PNPLA1Q8N8W4 532 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 GSTCDQ8NEC7 633 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ZNF417Q8TAU3 575 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 RSPRY1Q96DX4 576 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CCDC51Q96ER9 411 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 ZNF587Q96SQ5 575 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CORO1BQ9BR76 489 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 SSBP4Q9BWG4 385 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-209ENST00000475980 CNNM2Q9H8M5 875 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 IFT122Q9HBG6 1241 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 MIOSQ9NXC5 875 aa7.16□□□□□ -1.26
COL11A1-209ENST00000475980 KCNK4Q9NYG8 393 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms