RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 LETM1O95202 739 aaPredicted RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 FAM163BP0C2L3 166 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 RPL17P18621 184 aaKnown RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 OR1D2P34982 312 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 NCOA4Q13772 614 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 STX1AQ16623 288 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 TCERG1LQ5VWI1 586 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 KRT39Q6A163 491 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 C15orf39Q6ZRI6 1047 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 RTL10Q7L3V2 364 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 ALYREFQ86V81 257 aaKnown RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 THEM5Q8N1Q8 247 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 VN1R2Q8NFZ6 395 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 FAM84AQ96KN4 292 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 SRRTQ9BXP5 876 aaKnown RBP16.24■□□□□ 0.19
SNX13-207ENST00000475800 IMPG2Q9BZV3 1241 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 MAFFQ9ULX9 164 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 CDY1Q9Y6F8 540 aa16.24■□□□□ 0.19
SNX13-207ENST00000475800 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 TRIM49P0CI25 452 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 TRIM49CP0CI26 452 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 P4HA1P13674 534 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 MXI1P50539 228 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 MARSP56192 900 aaKnown RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 TNNC1P63316 161 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 SGSM1Q2NKQ1 1148 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 TPGS2Q68CL5 300 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 ANKRD54Q6NXT1 300 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 SMRP1Q8NCR6 262 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 CCDC150Q8NCX0 1101 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 CDH22Q9UJ99 828 aa16.23■□□□□ 0.19
SNX13-207ENST00000475800 TIMM13Q9Y5L4 95 aaPredicted RBP16.23■□□□□ 0.19
SNX13-207ENST00000475800 WDFY4Q6ZS81 3184 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 TGM5O43548 720 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 EPCAMP16422 314 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 GCLMP48507 274 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 LHX1P48742 406 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 MYL6P60660 151 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 MYL7Q01449 175 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 ROR1Q01973 937 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 PPP3CAQ08209 521 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 ZNF667Q5HYK9 610 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 ZNF461Q8TAF7 563 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 XYLT2Q9H1B5 865 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 MAN1C1Q9NR34 630 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
SNX13-207ENST00000475800 CLSTN1O94985 981 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 VNN1O95497 513 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 HLA-DRAP01903 254 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 CPB1P15086 417 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 PCSK1P29120 753 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 ITIH3Q06033 890 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 CETN1Q12798 172 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 UVSSAQ2YD98 709 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 LIN9Q5TKA1 542 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 CYP26C1Q6V0L0 522 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 CCDC149Q6ZUS6 474 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 LIMS2Q7Z4I7 341 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 ADGRF2Q8IZF7 708 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 KREMEN2Q8NCW0 462 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 FBXL13Q8NEE6 735 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 SLC35C1Q96A29 364 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 MMS19Q96T76 1030 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 MMRN2Q9H8L6 949 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 AFF4Q9UHB7 1163 aaKnown RBP16.21■□□□□ 0.19
SNX13-207ENST00000475800 L1RE1Q9UN81 338 aa16.21■□□□□ 0.19
SNX13-207ENST00000475800 TECTAO75443 2155 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 PMM2O15305 246 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 P4HA2O15460 535 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 ADAM12O43184 909 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 TACC1O75410 805 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 ABLIM3O94929 683 aa16.2■□□□□ 0.18
SNX13-207ENST00000475800 ASS1P00966 412 aaKnown RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
SNX13-207ENST00000475800 ELF1P32519 619 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms