RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MGAT3Q09327 533 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 NFX1Q12986 1120 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PAK2Q13177 524 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 BIRC3Q13489 604 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 CAMK2BQ13554 666 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 BTG3Q14201 252 aaPredicted RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 XKR4Q5GH76 650 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 FBXO47Q5MNV8 452 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 TWF2Q6IBS0 349 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ALKAL1Q6UXT8 129 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ZNF662Q6ZS27 426 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 TRAPPC11Q7Z392 1133 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ZNF677Q86XU0 584 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PRSS33Q8NF86 280 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 LMO3Q8TAP4 145 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 TSGA10Q9BZW7 698 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 INTS2Q9H0H0 1204 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ELAC1Q9H777 363 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PDE11AQ9HCR9 933 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 UBE2TQ9NPD8 197 aaPredicted RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PADI3Q9ULW8 664 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 UBQLN1Q9UMX0 589 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PIN4Q9Y237 131 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 C5orf42Q9H799 3197 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 LACTBL1A8MY62 500 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 LOC730098B7Z3J9 87 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 TISP43B9A030 160 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 LINC01565O15544 149 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 B4GALT5O43286 388 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 AKR1B10O60218 316 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ZNF500O60304 480 aaPredicted RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FAM189A1O60320 539 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 NOL4O94818 638 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 LINC00271P0C7V0 271 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 SOX5P35711 763 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 SNX16P57768 344 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 DLG4P78352 724 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FAM189BP81408 668 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ZXDAP98168 799 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 TFAMQ00059 246 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FOXK2Q01167 660 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 PTK2Q05397 1052 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 KLHL30Q0D2K2 578 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 NCOA4Q13772 614 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 BMS1Q14692 1282 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CBX2Q14781 532 aaPredicted RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ZBTB6Q15916 424 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ENOX2Q16206 610 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ASIC2Q16515 512 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 SLC10A6Q3KNW5 377 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CBWD6Q4V339 395 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CBWD3Q5JTY5 395 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CBWD5Q5RIA9 395 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 C1orf220Q5T0J3 134 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 PDXDC1Q6P996 788 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 SLC24A5Q71RS6 500 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FAM228AQ86W67 206 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 LRRC52Q8N7C0 313 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 EFHBQ8N7U6 833 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 SPATA18Q8TC71 538 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 KIAA1524Q8TCG1 905 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ZNF689Q96CS4 500 aaPredicted RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CPB2Q96IY4 423 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 MSLNLQ96KJ4 702 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CRACR2AQ9BSW2 395 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 HAPLN2Q9GZV7 340 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 NHEJ1Q9H9Q4 299 aaPredicted RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CDHR5Q9HBB8 845 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ERVK-5Q9HDB9 667 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ALG13Q9NP73 1137 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 RGS18Q9NS28 235 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 FAM105AQ9NUU6 356 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 CNTN3Q9P232 1028 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 NOC2LQ9Y3T9 749 aaKnown RBP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 PCDHB2Q9Y5E7 798 aa7.52□□□□□ -1.21
SHQ1-207ENST00000475558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.52□□□□□ -1.21
SHQ1-207ENST00000475558 ATG2AQ2TAZ0 1938 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 DGKIO75912 1065 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 NPTXRO95502 500 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 ASS1P00966 412 aaKnown RBP7.51□□□□□ -1.21
SHQ1-207ENST00000475558 HLA-DRAP01903 254 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 THP07101 528 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 TRIM49P0CI25 452 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 TRIM49CP0CI26 452 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 GHRP10912 638 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 HARSP12081 509 aaKnown RBP7.51□□□□□ -1.21
SHQ1-207ENST00000475558 GZMAP12544 262 aa7.51□□□□□ -1.21
SHQ1-207ENST00000475558 GTF2F1P35269 517 aaKnown RBP eCLIP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms