RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 RAD23BP54727 409 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SLC27A1Q6PCB7 646 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 ZDHHC14Q8IZN3 488 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 MREGQ8N565 214 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 WDTC1Q8N5D0 677 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 SEC14L1Q92503 715 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 CYP3A43Q9HB55 503 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 IP6K2Q9UHH9 426 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 RASAL2Q9UJF2 1139 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 USTQ9Y2C2 406 aa16.31■□□□□ 0.2
RPUSD3-215ENST00000475470 RNF40O75150 1001 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 SLC10A3P09131 477 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 BEX3Q00994 111 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 DNAJC24Q6P3W2 148 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 DNAJB3Q8WWF6 145 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 GJD2Q9UKL4 321 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 RARAP10276 462 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 ORC1Q13415 861 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 LLGL1Q15334 1064 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 CFAP58Q5T655 872 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 DENND1BQ6P3S1 775 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 NOTUMQ6P988 496 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 DCUN1D2Q6PH85 259 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 CCDC137Q6PK04 289 aaKnown RBP16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 JAMLQ86YT9 394 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 ERP44Q9BS26 406 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 Q9Y3F1 56 aa16.3■□□□□ 0.2
RPUSD3-215ENST00000475470 CITO14578 2027 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 TMEM191CA6NGB0 347 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 HAS3O00219 553 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 FSCN2O14926 492 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 PSTPIP1O43586 416 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 OPA1O60313 960 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 DARSP14868 501 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 YARSP54577 528 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 RPL7AP62424 266 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 CYP1B1Q16678 543 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 DDX27Q96GQ7 796 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 TMEM176AQ96HP8 235 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 RUNDC3BQ96NL0 473 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 CILPO75339 1184 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 MAN1A1P33908 653 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 HIC1Q14526 733 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 TTC27Q6P3X3 843 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 CCDC50Q8IVM0 306 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 CCDC105Q8IYK2 499 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 SLC4A11Q8NBS3 891 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 MAIP1Q8WWC4 291 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 LRRC45Q96CN5 670 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 MCEEQ96PE7 176 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 KATNAL1Q9BW62 490 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 EIF2AQ9BY44 585 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 TRIM6Q9C030 488 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 ELOVL4Q9GZR5 314 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
RPUSD3-215ENST00000475470 TREHO43280 583 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 COILP38432 576 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 PTGIRP43119 386 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 TAS2R40P59535 323 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 ADAM17P78536 824 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 TAP1Q03518 808 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 PTPN11Q06124 597 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 CRHR2Q13324 411 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 CYP4A22Q5TCH4 519 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 DUPD1Q68J44 220 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 ZIM3Q96PE6 472 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 TWNKQ96RR1 684 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 LCMT1Q9UIC8 334 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 TCRBV5S1A1TA0A578 114 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 PODXLO00592 558 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 SREBF2Q12772 1141 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 MYO1EQ12965 1108 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 DERAQ9Y315 318 aa16.28■□□□□ 0.2
RPUSD3-215ENST00000475470 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 GJC1P36383 396 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 FNTAP49354 379 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 KATNAL2Q8IYT4 538 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 IQCKQ8N0W5 287 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 C12orf50Q8NA57 414 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 C3orf20Q8ND61 904 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 HES2Q9Y543 173 aa16.27■□□□□ 0.2
RPUSD3-215ENST00000475470 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms