RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 PDCL2Q8N4E4 241 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 TMEM209Q96SK2 561 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 ACBD6Q9BR61 282 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 VRTNQ9H8Y1 702 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 CYP4F11Q9HBI6 524 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 AVENQ9NQS1 362 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.71■□□□□ 0.438e-14■□□□□ 9.8
ATG4B-216ENST00000475195 DNMT3BQ9UBC3 853 aaKnown RBP17.71■□□□□ 0.43
ATG4B-216ENST00000475195 L1RE1Q9UN81 338 aa17.71■□□□□ 0.43
ATG4B-216ENST00000475195 DOCK6Q96HP0 2047 aa17.71■□□□□ 0.42
ATG4B-216ENST00000475195 NOTCH4Q99466 2003 aa17.71■□□□□ 0.42
ATG4B-216ENST00000475195 CCL16O15467 120 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 HUS1O60921 280 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 OR4Q2P0C623 313 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 CPB1P15086 417 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 BMP6P22004 513 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 ATICP31939 592 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 DLG4P78352 724 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 BFSP1Q12934 665 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 GRASPQ7Z6J2 395 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-216ENST00000475195 LRRTM3Q86VH5 581 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 MKNK1Q9BUB5 465 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 MAN1B1Q9UKM7 699 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
ATG4B-216ENST00000475195 INSL5Q9Y5Q6 135 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 SNX9Q9Y5X1 595 aa17.7■□□□□ 0.42
ATG4B-216ENST00000475195 MYO10Q9HD67 2058 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 MTMR11A4FU01 709 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 TULP1O00294 542 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 PRRG1O14668 218 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 DCXO43602 365 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 PTPN2P17706 415 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 PSMC2P35998 433 aaKnown RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 PPP1R2P41236 205 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 LHX1P48742 406 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 MORC3Q14149 939 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 TDRD10Q5VZ19 366 aaKnown RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 CEP135Q66GS9 1140 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 ANKRD40Q6AI12 368 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 FOXR2Q6PJQ5 311 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 INTS8Q75QN2 995 aaKnown RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 TDRD5Q8NAT2 981 aaKnown RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 C2orf15Q8WU43 125 aaKnown RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 DHTKD1Q96HY7 919 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-216ENST00000475195 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 CRISPLD1Q9H336 500 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 EPS15L1Q9UBC2 864 aa17.69■□□□□ 0.42
ATG4B-216ENST00000475195 PPP1R3GB7ZBB8 358 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 TACC1O75410 805 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 VNN1O95497 513 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 LRG1P02750 347 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 VAMP7P51809 220 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 DUSP4Q13115 394 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 ZACNQ401N2 412 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 SV2AQ7L0J3 742 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 ATAD1Q8NBU5 361 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 KBTBD7Q8WVZ9 684 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 EDAQ92838 391 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 MYADMQ96S97 322 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 PKMYT1Q99640 499 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 CEP72Q9P209 647 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 MUTYHQ9UIF7 546 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 ZFP37Q9Y6Q3 630 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-216ENST00000475195 DOCK8Q8NF50 2099 aa17.68■□□□□ 0.42
ATG4B-216ENST00000475195 CETN3O15182 167 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 GPR37L1O60883 481 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 MICAL2O94851 1124 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 LAMP2P13473 410 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 CD44P16070 742 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 SP100P23497 879 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 FSHRP23945 695 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 CCNE1P24864 410 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 TUFMP49411 452 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 EPHA5P54756 1037 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 MYL6P60660 151 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 NTHL1P78549 312 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 FKBP3Q00688 224 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 LRRC63Q05C16 580 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 TRPC3Q13507 836 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 OSTM1Q86WC4 334 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 FAM186BQ8IYM0 893 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 DCP1BQ8IZD4 617 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 SPPL2BQ8TCT7 592 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 PGLYRP2Q96PD5 576 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 C1QTNF1Q9BXJ1 281 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 HCFC1R1Q9NWW0 138 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 DDX43Q9NXZ2 648 aaKnown RBP17.67■□□□□ 0.42
ATG4B-216ENST00000475195 KIAA1468Q9P260 1216 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 LIMD1Q9UGP4 676 aa17.67■□□□□ 0.42
ATG4B-216ENST00000475195 ZXDAP98168 799 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 MYL7Q01449 175 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 TWF1Q12792 350 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 PTPN21Q16825 1174 aa17.66■□□□□ 0.42
ATG4B-216ENST00000475195 SGSM1Q2NKQ1 1148 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms