RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 FAM26FQ5R3K3 315 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 RESP18Q5W5W9 173 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 MTSS1LQ765P7 747 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 PDZD4Q76G19 769 aaPredicted RBP10.18□□□□□ -0.78
PDPN-204ENST00000475043 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 NT5DC4Q86YG4 428 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 BRSK2Q8IWQ3 736 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CEP57L1Q8IYX8 460 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 PRSS33Q8NF86 280 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CACTINQ8WUQ7 758 aaKnown RBP10.18□□□□□ -0.78
PDPN-204ENST00000475043 ZNF512Q96ME7 567 aaPredicted RBP10.18□□□□□ -0.78
PDPN-204ENST00000475043 C7orf25Q9BPX7 421 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 RPP25Q9BUL9 199 aaKnown RBP10.18□□□□□ -0.78
PDPN-204ENST00000475043 MAGEF1Q9HAY2 307 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 RCOR1Q9UKL0 485 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 DSEQ9UL01 958 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 KCNH3Q9ULD8 1083 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 CA14Q9ULX7 337 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 MAFFQ9ULX9 164 aa10.18□□□□□ -0.78
PDPN-204ENST00000475043 KPNA7A9QM74 516 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 ZNF197O14709 1029 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 EIF3DO15371 548 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDPN-204ENST00000475043 ITGB3P05106 788 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 KRT19P08727 400 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 TMEM191BP0C7N4 346 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 POLR2BP30876 1174 aaKnown RBP10.17□□□□□ -0.78
PDPN-204ENST00000475043 CDR1P51861 262 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 WNT7BP56706 349 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 KRT85P78386 507 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 NHLH1Q02575 133 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 DUSP4Q13115 394 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 GPR17Q13304 367 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 MYBPC2Q14324 1141 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 UNC13DQ70J99 1090 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 NELFCDQ8IXH7 590 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 GRAMD1CQ8IYS0 662 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 THEM5Q8N1Q8 247 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 TMEM105Q8N8V8 129 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 GPR152Q8TDT2 470 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 SPATA32Q96LK8 384 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 ZNF560Q96MR9 790 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 TMEM209Q96SK2 561 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 KXD1Q9BQD3 176 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 PDE11AQ9HCR9 933 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 SLC39A2Q9NP94 309 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 CEP72Q9P209 647 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 WNT16Q9UBV4 365 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 SERTAD1Q9UHV2 236 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 AGAP1Q9UPQ3 857 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 SLC27A5Q9Y2P5 690 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 R3HCC1Q9Y3T6 440 aaKnown RBP10.17□□□□□ -0.78
PDPN-204ENST00000475043 YIPF1Q9Y548 306 aa10.17□□□□□ -0.78
PDPN-204ENST00000475043 WDFY4Q6ZS81 3184 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 A0A1B0GVL5 298 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 MTMR11A4FU01 709 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ZNF233A6NK53 670 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 KIAA0391O15091 583 aaKnown RBP10.16□□□□□ -0.78
PDPN-204ENST00000475043 CYP11A1P05108 521 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 MYL4P12829 197 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CEBPBP17676 345 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 HOXD13P35453 343 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 PNPLA4P41247 253 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ALDH1A3P47895 512 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CLCN5P51795 746 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 EPHB3P54753 998 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 GPC5P78333 572 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 BFSP1Q12934 665 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 PLD1Q13393 1074 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CUL4BQ13620 913 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 SLC39A12Q504Y0 691 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 WSCD1Q658N2 575 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 LMBRD2Q68DH5 695 aaPredicted RBP10.16□□□□□ -0.78
PDPN-204ENST00000475043 CNNM4Q6P4Q7 775 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CBWD2Q8IUF1 395 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CSGALNACT2Q8N6G5 542 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 C1orf127Q8N9H9 656 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 RDH13Q8NBN7 331 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ATAD1Q8NBU5 361 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 OR10T2Q8NGX3 314 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ZNF507Q8TCN5 953 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 LEO1Q8WVC0 666 aaPredicted RBP10.16□□□□□ -0.78
PDPN-204ENST00000475043 TCEAL4Q96EI5 215 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CHAMP1Q96JM3 812 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 FAM84AQ96KN4 292 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 MTMR12Q9C0I1 747 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 CRISPLD1Q9H336 500 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ASAH2Q9NR71 780 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 GDE1Q9NZC3 331 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 HSPBP1Q9NZL4 362 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 ATP6V1DQ9Y5K8 247 aa10.16□□□□□ -0.78
PDPN-204ENST00000475043 PVALEFA0A1B0GWK0 134 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 KRBA1A5PL33 1030 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 H0Y858 1186 aa10.15□□□□□ -0.78
PDPN-204ENST00000475043 CLIC2O15247 247 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms