RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TMEM117Q9H0C3 514 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 ETNK2Q9NVF9 386 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 A6NJR5 290 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 B2RBV5 119 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 RAD21O60216 631 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 USP1O94782 785 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 NOP14P78316 857 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 PDIA2Q13087 525 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 LLGL2Q6P1M3 1020 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 MYLK4Q86YV6 388 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 NAT14Q8WUY8 206 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 PPP2R3CQ969Q6 453 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 OXNAD1Q96HP4 312 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 HIC2Q96JB3 615 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 CYTH2Q99418 400 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 EBF3Q9H4W6 596 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 CHMP2AO43633 222 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 BANF1O75531 89 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 GEMIN4P57678 1058 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 EFHC2Q5JST6 749 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 NET1Q7Z628 596 aaPredicted RBP19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 CCDC110Q8TBZ0 833 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 CLPTM1LQ96KA5 538 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 KLF6Q99612 283 aaPredicted RBP19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 CBWD1Q9BRT8 395 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 STRA6Q9BX79 667 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 PPCSQ9HAB8 311 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 PPM1HQ9ULR3 514 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 ALOX15BO15296 676 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 TM9SF1O15321 606 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 BAG2O95816 211 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 MYL2P10916 166 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 ETS1P14921 441 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 AP2B1P63010 937 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 MYBPC2Q14324 1141 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 KCTD17Q8N5Z5 321 aa19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 DDX4Q9NQI0 724 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-214ENST00000474289 TGDSO95455 350 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 CALCAP01258 141 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 GRIA2P42262 883 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 MFAP3P55082 362 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ARL4CP56559 192 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 GPX6P59796 221 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ACTR3P61158 418 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 USP46P62068 366 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 CLEC16AQ2KHT3 1053 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 TRMT5Q32P41 509 aaKnown RBP19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ACAD11Q709F0 780 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ALYREFQ86V81 257 aaKnown RBP19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 SPATA24Q86W54 205 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 TMPRSS6Q8IU80 811 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 SCUBE1Q8IWY4 988 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 BANPQ8N9N5 519 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 RBM15BQ8NDT2 890 aaKnown RBP19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 SEMA4DQ92854 862 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 MIS12Q9H081 205 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 RANBP17Q9H2T7 1088 aaKnown RBP19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 TUFT1Q9NNX1 390 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 DAGLAQ9Y4D2 1042 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 GAKO14976 1311 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 CIITAP33076 1130 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ARSEP51690 589 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 PTP4A2Q12974 167 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 GPS1Q13098 491 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 DLGAP5Q15398 846 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 C2CD6Q53TS8 623 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 RAPH1Q70E73 1250 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 ANKMY2Q8IV38 441 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 MZB1Q8WU39 189 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 PLEKHG4BQ96PX9 1271 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 DNPEPQ9ULA0 475 aa19.59■□□□□ 0.73
ECHDC1-214ENST00000474289 BUD23O43709 281 aaKnown RBP19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 CD58P19256 250 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 TAS2R40P59535 323 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 SNAP25P60880 206 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 FAM91A1Q658Y4 838 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 NME8Q8N427 588 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 DHX38Q92620 1227 aaKnown RBP19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 WRAP73Q9P2S5 460 aaPredicted RBP19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 DNAJB4Q9UDY4 337 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 RABGEF1Q9UJ41 708 aa19.58■□□□□ 0.72
ECHDC1-214ENST00000474289 K7ENM7 598 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 OPHN1O60890 802 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 CLUHO75153 1309 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 RPS6KA4O75676 772 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 ASLP04424 464 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 HARSP12081 509 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 VAV1P15498 845 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 GJC1P36383 396 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 SH3BGRP55822 239 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 OTOP1Q7RTM1 612 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 TREML1Q86YW5 311 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 ULK2Q8IYT8 1036 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 MCOLN2Q8IZK6 566 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 ELMO3Q96BJ8 720 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 FAM163AQ96GL9 167 aaPredicted RBP19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 SLC7A8Q9UHI5 535 aa19.57■□□□□ 0.72
ECHDC1-214ENST00000474289 PLA2G4CQ9UP65 541 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms