RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MYL6P60660 151 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 ADCY1Q08828 1119 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 SMARCB1Q12824 385 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 TPD52L1Q16890 204 aaPredicted RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 ZNF699Q32M78 642 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 WDR72Q3MJ13 1102 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 CCDC40Q4G0X9 1142 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 DCAF17Q5H9S7 520 aaPredicted RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 TDRD10Q5VZ19 366 aaKnown RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 GPR149Q86SP6 731 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 ELMOD1Q8N336 334 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 PDCL2Q8N4E4 241 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 CXorf38Q8TB03 319 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 PHF7Q9BWX1 381 aaPredicted RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 PRKD2Q9BZL6 878 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 DDX43Q9NXZ2 648 aaKnown RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
USF1-205ENST00000473969 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 POLIQ9UNA4 740 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 NR2E1Q9Y466 385 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 ANK1P16157 1881 aa14.76□□□□□ -0.05
USF1-205ENST00000473969 STAU1O95793 577 aaKnown RBP14.75□□□□□ -0.05
USF1-205ENST00000473969 GNA14O95837 355 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 WEE2P0C1S8 567 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 TRIM49P0CI25 452 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 TRIM49CP0CI26 452 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 PCSK1P29120 753 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 HOXA9P31269 272 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 GCLMP48507 274 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 GPR17Q13304 367 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 SGSM1Q2NKQ1 1148 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 ZACNQ401N2 412 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 ZNF667Q5HYK9 610 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 KRT39Q6A163 491 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 FOXR2Q6PJQ5 311 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 RNF19BQ6ZMZ0 732 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 SV2AQ7L0J3 742 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 ADHFE1Q8IWW8 467 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 GPT2Q8TD30 523 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 SUSD6Q92537 303 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 TAF4BQ92750 862 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 TMEM8AQ9HCN3 771 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 NXF1Q9UBU9 619 aaKnown RBP14.75□□□□□ -0.05
USF1-205ENST00000473969 RWDD2AQ9UIY3 292 aa14.75□□□□□ -0.05
USF1-205ENST00000473969 FAM163BP0C2L3 166 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 OR4Q2P0C623 313 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 PTMSP20962 102 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 NLRP12P59046 1061 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 PLD1Q13393 1074 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 SOWAHAQ2M3V2 549 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 SLC39A12Q504Y0 691 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 TTI2Q6NXR4 508 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 SASS6Q6UVJ0 657 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 FRMD5Q7Z6J6 570 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 CREBRFQ8IUR6 639 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 ZC3H3Q8IXZ2 948 aaKnown RBP14.74□□□□□ -0.05
USF1-205ENST00000473969 TCEAL8Q8IYN2 117 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 PGLYRP2Q96PD5 576 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 ACBD6Q9BR61 282 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 SRRTQ9BXP5 876 aaKnown RBP14.74□□□□□ -0.05
USF1-205ENST00000473969 RHOBTB2Q9BYZ6 727 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
USF1-205ENST00000473969 BRWD1Q9NSI6 2320 aa14.74□□□□□ -0.05
USF1-205ENST00000473969 VWA8A3KMH1 1905 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 CCL16O15467 120 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 HLA-DRAP01903 254 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 CCDC192P0DO97 292 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 TRIM21P19474 475 aaKnown RBP14.73□□□□□ -0.05
USF1-205ENST00000473969 GNL1P36915 607 aaPredicted RBP14.73□□□□□ -0.05
USF1-205ENST00000473969 ALDH1A3P47895 512 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 MXI1P50539 228 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 CETN1Q12798 172 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 NFE2Q16621 373 aaPredicted RBP14.73□□□□□ -0.05
USF1-205ENST00000473969 CCDC183Q5T5S1 534 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 SCARA3Q6AZY7 606 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 IQCEQ6IPM2 695 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 GJD3Q8N144 294 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 OR6B3Q8NGW1 331 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 OR10T2Q8NGX3 314 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 C2orf15Q8WU43 125 aaKnown RBP14.73□□□□□ -0.05
USF1-205ENST00000473969 ACSF2Q96CM8 615 aaPredicted RBP14.73□□□□□ -0.05
USF1-205ENST00000473969 TMEM209Q96SK2 561 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 DNAI2Q9GZS0 605 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 POMKQ9H5K3 350 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 VRTNQ9H8Y1 702 aa14.73□□□□□ -0.05
USF1-205ENST00000473969 MTMR11A4FU01 709 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 A8MXQ7 604 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 TACC1O75410 805 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 VNN1O95497 513 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 WARSP23381 471 aaKnown RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 TUFMP49411 452 aaKnown RBP14.72□□□□□ -0.05
USF1-205ENST00000473969 EPHB3P54753 998 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 PPP3CAQ08209 521 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 DUSP4Q13115 394 aa14.72□□□□□ -0.05
USF1-205ENST00000473969 MAPRE1Q15691 268 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms