RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TBX20Q9UMR3 447 aa11.54□□□□□ -0.56
SSBP1-209ENST00000473783 NUB1Q9Y5A7 615 aa11.54□□□□□ -0.56
SSBP1-209ENST00000473783 PCDHB9Q9Y5E1 797 aa11.54□□□□□ -0.56
SSBP1-209ENST00000473783 OBSL1O75147 1896 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 ZBTB39O15060 712 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 ARHGAP6O43182 974 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 MAP3K13O43283 966 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 MARCH6O60337 910 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 ALDH1A3P47895 512 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 SOX4Q06945 474 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 TTC22Q5TAA0 569 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 ARMCX6Q7L4S7 300 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 ITIH5Q86UX2 942 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 EZH1Q92800 747 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 FNBP1Q96RU3 617 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 OXCT2Q9BYC2 517 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 POLR3FQ9H1D9 316 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
SSBP1-209ENST00000473783 CAPN10Q9HC96 672 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 KCNMB3Q9NPA1 279 aa11.53□□□□□ -0.56
SSBP1-209ENST00000473783 MYO18AQ92614 2054 aaKnown RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 SMIM28A0A1B0GU29 152 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CAPN9O14815 690 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 SLC37A4O43826 429 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 SH3BP5O60239 455 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 VNN2O95498 520 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CDC25CP30307 473 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 GJA4P35212 333 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 AKAP17AQ02040 695 aaKnown RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 PSMD2Q13200 908 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CREB3L3Q68CJ9 461 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 TRIM68Q6AZZ1 485 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 TMPRSS7Q7RTY8 843 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 DNAJB7Q7Z6W7 309 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 GLRX5Q86SX6 157 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 TMEFF1Q8IYR6 380 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CD101Q93033 1021 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 DYDC2Q96IM9 177 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CCDC43Q96MW1 224 aaKnown RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 GCNAQ96QF7 691 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 C2orf40Q9H1Z8 148 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 CLMPQ9H6B4 373 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 KIF9Q9HAQ2 790 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 POLMQ9NP87 494 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 TOPORSQ9NS56 1045 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 VPS54Q9P1Q0 977 aa11.52□□□□□ -0.57
SSBP1-209ENST00000473783 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 ATXN2Q99700 1313 aaKnown RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 HELZP42694 1942 aaKnown RBP11.52□□□□□ -0.57
SSBP1-209ENST00000473783 ACKR2O00590 384 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 ARHGAP33O14559 1287 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 ALDH1A2O94788 518 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 LYPLA2O95372 231 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 ARSAP15289 507 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 ITPKAP23677 461 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 NLRP5P59047 1200 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CYP4F8P98187 520 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 EXOSC10Q01780 885 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CYP4F3Q08477 520 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 DUSP4Q13115 394 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CTTNQ14247 550 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CRY1Q16526 586 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 EEF1DP3Q658K8 133 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 NAIF1Q69YI7 327 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 APBB1IPQ7Z5R6 666 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 NAXDQ8IW45 347 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 USP33Q8TEY7 942 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 WHAMMQ8TF30 809 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 DDX12PQ92771 950 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CAMK1GQ96NX5 476 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 RNF26Q9BY78 433 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 SMG9Q9H0W8 520 aaKnown RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CRISPLD1Q9H336 500 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 FSCN3Q9NQT6 498 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 SH3GLB2Q9NR46 395 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 MMP17Q9ULZ9 603 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 MUC22E2RYF6 1773 aaPredicted RBP11.51□□□□□ -0.57
SSBP1-209ENST00000473783 TSC2P49815 1807 aa11.51□□□□□ -0.57
SSBP1-209ENST00000473783 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 GJB3O75712 270 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 OAZ2O95190 189 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 SYPP08247 313 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 U2AF2P26368 475 aaKnown RBP eCLIP11.5□□□□□ -0.57
SSBP1-209ENST00000473783 MCM4P33991 863 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 AVPR1AP37288 418 aa11.5□□□□□ -0.57
SSBP1-209ENST00000473783 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
SSBP1-209ENST00000473783 YWHAHQ04917 246 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms