RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TLR9Q9NR96 1032 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 KCNH7Q9NS40 1196 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 C1orf112Q9NSG2 853 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.83□□□□□ -1.96
CALD1-216ENST00000473714 ANKFY1Q9P2R3 1169 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 SIT1Q9Y3P8 196 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 DAAM1Q9Y4D1 1078 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 A0A1W2PP64 1363 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 TECTAO75443 2155 aa2.83□□□□□ -1.96
CALD1-216ENST00000473714 CHD7Q9P2D1 2997 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 BRWD1Q9NSI6 2320 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TRIOO75962 3097 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 VPS13AQ96RL7 3174 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TEP1Q99973 2627 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 KRTAP29-1A8MX34 341 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 K7ESF4 209 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TAF4O00268 1085 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 MAN2B1O00754 1011 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 FOXP2O15409 715 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TGM5O43548 720 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SH3BP5O60239 455 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 B4GALT4O60513 344 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PPP1R11O60927 126 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 NTRK1P04629 796 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 AMY2AP04746 511 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 MYL3P08590 195 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 CLEC2LP0C7M8 214 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 MYBP10242 640 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 OSMP13725 252 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TRIM27P14373 513 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 AMY2BP19961 511 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 GJA4P35212 333 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 IL12RB1P42701 662 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SLC5A3P53794 718 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 ZNF280AP59817 542 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 PHC1P78364 1004 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SRSF2Q01130 221 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 PTH1RQ03431 593 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 ODF1Q14990 250 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 LLGL1Q15334 1064 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 CT83Q5H943 113 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TMEM240Q5SV17 173 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 GPR158Q5T848 1215 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PRAMEF9Q5VWM5 478 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 CC2D1AQ6P1N0 951 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 C1orf228Q6PIY5 440 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 KCTD1Q719H9 257 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 C11orf96Q7Z7L8 435 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 STK32CQ86UX6 486 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 NBPF5PQ86XG9 351 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 SUGP1Q8IWZ8 645 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 RBM12BQ8IXT5 1001 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 CMTR2Q8IYT2 770 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 FAM43AQ8N2R8 423 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 ENAHQ8N8S7 591 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 NETO2Q8NC67 525 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 VPS37AQ8NEZ2 397 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PJA1Q8NG27 643 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SVIPQ8NHG7 77 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 LMBR1Q8WVP7 490 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 BRI3BPQ8WY22 251 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 BADQ92934 168 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 EAF2Q96CJ1 260 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 RAX2Q96IS3 184 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TEKT5Q96M29 485 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 AIFM3Q96NN9 605 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SLC2A13Q96QE2 648 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 NAP1L4Q99733 375 aaKnown RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 SARGQ9BW04 601 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TMX4Q9H1E5 349 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 MS4A5Q9H3V2 200 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PPCSQ9HAB8 311 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 TCF7L1Q9HCS4 588 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 CCM2LQ9NUG4 571 aaPredicted RBP2.82□□□□□ -1.96
CALD1-216ENST00000473714 ARHGAP28Q9P2N2 729 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 FBXL7Q9UJT9 491 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 INTUQ9ULD6 942 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 GABRQQ9UN88 632 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SRPK3Q9UPE1 567 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 GPR45Q9Y5Y3 372 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 RTL1A6NKG5 1358 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 CHD9Q3L8U1 2897 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 PSME4Q14997 1843 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 FRMPD3Q5JV73 1810 aa2.82□□□□□ -1.96
CALD1-216ENST00000473714 SPTBN2O15020 2390 aa2.81□□□□□ -1.96
CALD1-216ENST00000473714 UBA6A0AVT1 1052 aaPredicted RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 LCHNA4D1U4 455 aa2.81□□□□□ -1.96
CALD1-216ENST00000473714 PQBP1O60828 265 aaKnown RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 CLASP2O75122 1294 aaKnown RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 HSP90AB1P08238 724 aaKnown RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 PTPN1P18031 435 aaKnown RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 LPOP22079 712 aaPredicted RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 ENPP1P22413 925 aa2.81□□□□□ -1.96
CALD1-216ENST00000473714 XPAP23025 273 aaPredicted RBP2.81□□□□□ -1.96
CALD1-216ENST00000473714 AKAP5P24588 427 aa2.81□□□□□ -1.96
CALD1-216ENST00000473714 AVPR2P30518 371 aa2.81□□□□□ -1.96
CALD1-216ENST00000473714 GPR3P46089 330 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms