RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MYL7Q01449 175 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 DUSP4Q13115 394 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 TRPC3Q13507 836 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 VEPH1Q14D04 833 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 DUOXA2Q1HG44 320 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MGAT5BQ3V5L5 792 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 SLC39A12Q504Y0 691 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 TCEAL8Q8IYN2 117 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 DCP1BQ8IZD4 617 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 FLCNQ8NFG4 579 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 SCFD1Q8WVM8 642 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 FGF13Q92913 245 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 NXPE3Q969Y0 559 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 SMOC2Q9H3U7 446 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 ABI2Q9NYB9 513 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 DNMT3BQ9UBC3 853 aaKnown RBP12.41□□□□□ -0.42
CPNE1-222ENST00000473373 MAFFQ9ULX9 164 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 YIPF1Q9Y548 306 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 SNX9Q9Y5X1 595 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 DENND4CQ5VZ89 1909 aa12.41□□□□□ -0.42
CPNE1-222ENST00000473373 A0A1W2PQ27 194 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 A0A1W2PQ64 194 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 A0A1W2PQD8 194 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 SPTLC1O15269 473 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 CALUO43852 315 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-222ENST00000473373 N4BP1O75113 896 aaKnown RBP12.4□□□□□ -0.42
CPNE1-222ENST00000473373 PRPF40AO75400 957 aaKnown RBP12.4□□□□□ -0.42
CPNE1-222ENST00000473373 ZNF202O95125 648 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 BIRC3Q13489 604 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 WSCD1Q658N2 575 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 CEP135Q66GS9 1140 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 EPM2AIP1Q7L775 607 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-222ENST00000473373 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 C1orf127Q8N9H9 656 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 ITFG1Q8TB96 612 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 GCNAQ96QF7 691 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 EPS15L1Q9UBC2 864 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 HOOK1Q9UJC3 728 aaKnown RBP12.4□□□□□ -0.42
CPNE1-222ENST00000473373 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 SLC27A5Q9Y2P5 690 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 NUMBLQ9Y6R0 609 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 USP34Q70CQ2 3546 aa12.4□□□□□ -0.42
CPNE1-222ENST00000473373 ZFHX2Q9C0A1 2572 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-222ENST00000473373 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 TBC1D4O60343 1298 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 CYP11A1P05108 521 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 POU2F2P09086 479 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 WNT7BP56706 349 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 TNNC1P63316 161 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 GPR17Q13304 367 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 ITIH5Q86UX2 942 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 SIX5Q8N196 739 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 LEMD2Q8NC56 503 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 FAM84AQ96KN4 292 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 TMEM209Q96SK2 561 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 CGRRF1Q99675 332 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 IRF2BPLQ9H1B7 796 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 DDX43Q9NXZ2 648 aaKnown RBP12.39□□□□□ -0.43
CPNE1-222ENST00000473373 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-222ENST00000473373 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
CPNE1-222ENST00000473373 OBSL1O75147 1896 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 TGFB1I1O43294 461 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 NARSO43776 548 aaKnown RBP12.38□□□□□ -0.43
CPNE1-222ENST00000473373 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 CEBPBP17676 345 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 HOXD13P35453 343 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 ANP32AP39687 249 aaKnown RBP12.38□□□□□ -0.43
CPNE1-222ENST00000473373 TUFMP49411 452 aaKnown RBP12.38□□□□□ -0.43
CPNE1-222ENST00000473373 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 STK4Q13043 487 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 ARHGAP15Q53QZ3 475 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 SLC44A3Q8N4M1 653 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 PCDHB5Q9Y5E4 795 aa12.38□□□□□ -0.43
CPNE1-222ENST00000473373 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
CPNE1-222ENST00000473373 KLRC4O43908 158 aa12.37□□□□□ -0.43
CPNE1-222ENST00000473373 SOAT2O75908 522 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms