RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MAPK4P31152 587 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 DPP6P42658 865 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 MC1RQ01726 317 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 CREB5Q02930 508 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 UBE3AQ05086 875 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 COASYQ13057 564 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 SLC9C2Q5TAH2 1124 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 MAP1SQ66K74 1059 aaPredicted RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 CREB3L3Q68CJ9 461 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 SULT6B1Q6IMI4 303 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 TSPYL5Q86VY4 417 aaPredicted RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 RIOX2Q8IUF8 465 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 RPAP2Q8IXW5 612 aaPredicted RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 THNSL1Q8IYQ7 743 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 ANKRD20A12PQ8NF67 263 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 ADCY4Q8NFM4 1077 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 DCAF4Q8WV16 495 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 HSPH1Q92598 858 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 TEKT1Q969V4 418 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 CABS1Q96KC9 395 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 COLEC11Q9BWP8 271 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 RWDD1Q9H446 243 aaPredicted RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 RABEP2Q9H5N1 569 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 SYNCQ9H7C4 482 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 TOMM22Q9NS69 142 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 COQ3Q9NZJ6 369 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 USP36Q9P275 1121 aaKnown RBP6.49□□□□□ -1.37
RTF1-203ENST00000473214 FEM1BQ9UK73 627 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 STXBP5LQ9Y2K9 1186 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
RTF1-203ENST00000473214 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 ARHGAP10A1A4S6 786 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 AQP12BA6NM10 295 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 UBE2CO00762 179 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 PSMA7O14818 248 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 KDM1AO60341 852 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 KERAO60938 352 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 PPFIA2O75334 1257 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TSPAN9O75954 239 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SASH1O94885 1247 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TMEM63AO94886 807 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SCGB1D1O95968 90 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 AFPP02771 609 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 SNRNP70P08621 437 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 QDPRP09417 244 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 ECI1P42126 302 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 MTHFRP42898 656 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 AFMP43652 599 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 SLC12A1Q13621 1099 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 PDCD1Q15116 288 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 UBE3CQ15386 1083 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 PRSS53Q2L4Q9 553 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 FBLN7Q53RD9 439 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SNX30Q5VWJ9 437 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 DCAF15Q66K64 600 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SCARA3Q6AZY7 606 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 MCTP2Q6DN12 878 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 GTF2IRD2BQ6EKJ0 949 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 OLFM4Q6UX06 510 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TMTC3Q6ZXV5 915 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TTC7BQ86TV6 843 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 GTF2IRD2Q86UP8 949 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 ZBTB44Q8NCP5 570 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 OR52K2Q8NGK3 314 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 KLHDC4Q8TBB5 520 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SHC3Q92529 594 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 FEM1CQ96JP0 617 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 CCDC114Q96M63 670 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TCHPQ9BT92 498 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 CCDC94Q9BW85 323 aaPredicted RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 CELF4Q9BZC1 486 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 ZDHHC5Q9C0B5 715 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 TNMDQ9H2S6 317 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 TMEM51Q9NW97 253 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 CHORDC1Q9UHD1 332 aaPredicted RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 ZNF215Q9UL58 517 aaPredicted RBP6.48□□□□□ -1.37
RTF1-203ENST00000473214 ATRNO75882 1429 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 SETD5Q9C0A6 1442 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 PASKQ96RG2 1323 aa6.48□□□□□ -1.37
RTF1-203ENST00000473214 A0A1W2PPC4 97 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 ARVCFO00192 962 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CACNB4O00305 520 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 ARHGAP6O43182 974 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CCP110O43303 1012 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
RTF1-203ENST00000473214 PALMO75781 387 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 KRT37O76014 449 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 MLYCDO95822 493 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 CKMP06732 381 aa6.47□□□□□ -1.37
RTF1-203ENST00000473214 HNRNPA1P09651 372 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms