RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TMEM191BP0C7N4 346 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ITGA4P13612 1032 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 HSD17B3P37058 310 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 GYS2P54840 703 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 NOP14P78316 857 aaKnown RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 MRPS25P82663 173 aaKnown RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 CAV1Q03135 178 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 LMNB2Q03252 620 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 MCL1Q07820 350 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 IFFO1Q0D2I5 559 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 LAMTOR4Q0VGL1 99 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SNAPC2Q13487 334 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 LAMC2Q13753 1193 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PTPROQ16827 1216 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 FAM153CQ494X1 144 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 CEP85LQ5SZL2 805 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 EMC10Q5UCC4 262 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 DCAF12L1Q5VU92 463 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 DUPD1Q68J44 220 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 MPZL3Q6UWV2 235 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 CRELD2Q6UXH1 353 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ZBTB33Q86T24 672 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SPATS2Q86XZ4 545 aaKnown RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PHF13Q86YI8 300 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 JAMLQ86YT9 394 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 RHOT1Q8IXI2 618 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ABRAQ8N0Z2 381 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 KDF1Q8NAX2 398 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 RBBP8NLQ8NC74 664 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 UBLCP1Q8WVY7 318 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PRPF31Q8WWY3 499 aaKnown RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ALG3Q92685 438 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SLCO2A1Q92959 643 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ATP6V1G3Q96LB4 118 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SPATA33Q96N06 139 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PCYT2Q99447 389 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 GPR20Q99678 358 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ACO2Q99798 780 aaKnown RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 NFKBIZQ9BYH8 718 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 CCDC113Q9H0I3 377 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 FAM124BQ9H5Z6 455 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PARVAQ9NVD7 372 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PRMT7Q9NVM4 692 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ADAM22Q9P0K1 906 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 IP6K2Q9UHH9 426 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 FAM153AQ9UHL3 310 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 ZHX1Q9UKY1 873 aaPredicted RBP8.12□□□□□ -1.11
CCDC171-205ENST00000472806 SLC45A1Q9Y2W3 748 aa8.12□□□□□ -1.11
CCDC171-205ENST00000472806 COL1A2P08123 1366 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CNTNAP2Q9UHC6 1331 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 DNAJC25-GNG10A0A024R161 153 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ZSCAN5CA6NGD5 496 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ACKR2O00590 384 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 FSCN2O14926 492 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 MSCO60682 206 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 PPFIA2O75334 1257 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CNMDO75829 334 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 PROSCO94903 275 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 VNN1O95497 513 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ECEL1O95672 775 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 GAS8O95995 478 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ASS1P00966 412 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TXNP10599 105 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 P4HA1P13674 534 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 NR1D1P20393 614 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ACO1P21399 889 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TMOD1P28289 359 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ECHS1P30084 290 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 POLR2BP30876 1174 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 COILP38432 576 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 PHKA2P46019 1235 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 HNRNPH2P55795 449 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 NOMO3P69849 1222 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CALCOCO2Q13137 446 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ZNF211Q13398 564 aaPredicted RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 SUZ12Q15022 739 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 PLCB4Q15147 1175 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 LY6KQ17RY6 165 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ODF2Q5BJF6 829 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 NAA35Q5VZE5 725 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CCDC137Q6PK04 289 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TSHZ1Q6ZSZ6 1077 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 MON1BQ7L1V2 547 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TMC3Q7Z5M5 1100 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CCDC105Q8IYK2 499 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TTC39CQ8N584 583 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 RNF149Q8NC42 400 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 TMEM35BQ8NCS4 154 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 ADAM32Q8TC27 787 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 CCHCR1Q8TD31 782 aa8.11□□□□□ -1.11
CCDC171-205ENST00000472806 NANOS1Q8WY41 292 aaKnown RBP8.11□□□□□ -1.11
CCDC171-205ENST00000472806 RIN2Q8WYP3 895 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms