RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 NEUROD6Q96NK8 337 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 DNAJC2Q99543 621 aaKnown RBP2.85□□□□□ -1.95
VPS45-206ENST00000472756 UTP14AQ9BVJ6 771 aaKnown RBP2.85□□□□□ -1.95
VPS45-206ENST00000472756 SLC29A3Q9BZD2 475 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 TM6SF1Q9BZW5 370 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 CCDC113Q9H0I3 377 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 PUS7LQ9H0K6 701 aaKnown RBP2.85□□□□□ -1.95
VPS45-206ENST00000472756 DIAPH3Q9NSV4 1193 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 PAG1Q9NWQ8 432 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 HMG20BQ9P0W2 317 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 SIRPGQ9P1W8 387 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 NARFQ9UHQ1 456 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 TLK1Q9UKI8 766 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 TRPC5Q9UL62 973 aaPredicted RBP2.85□□□□□ -1.95
VPS45-206ENST00000472756 NIP7Q9Y221 180 aaKnown RBP eCLIP2.85□□□□□ -1.95
VPS45-206ENST00000472756 MSRB2Q9Y3D2 182 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 SH3TC1Q8TE82 1336 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 LRP5O75197 1615 aa2.85□□□□□ -1.95
VPS45-206ENST00000472756 RPAP1Q9BWH6 1393 aaPredicted RBP2.85□□□□□ -1.95
VPS45-206ENST00000472756 AFDNP55196 1824 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 ANKRD18BA2A2Z9 1011 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 CCDC66A2RUB6 948 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 TRIM38O00635 465 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 SCDO00767 359 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 RNF113AO15541 343 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 PRKAB2O43741 272 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 NCR1O76036 304 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 RASGRP1O95267 797 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 BAG4O95429 457 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 CFBP00751 764 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 IFIT1P09914 478 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 C6orf222P0C671 652 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 HSPD1P10809 573 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 GYS1P13807 737 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 RPS6KB1P23443 525 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 APOBEC3AP31941 199 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 GTF2F1P35269 517 aaKnown RBP eCLIP2.84□□□□□ -1.95
VPS45-206ENST00000472756 ADD2P35612 726 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 DEKP35659 375 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 KIR2DL3P43628 341 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 RARRES1P49788 294 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 PROK1P58294 105 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 SUMO1P63165 101 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 SIM1P81133 766 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 CHRNDQ07001 517 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 DDR1Q08345 913 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 SSRP1Q08945 709 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 ZNF169Q14929 603 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 ATP2B3Q16720 1220 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 MCMDC2Q4G0Z9 681 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 ZC3H12BQ5HYM0 836 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 CASC1Q6TDU7 716 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 BTNL9Q6UXG8 535 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 LDHAL6AQ6ZMR3 332 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 NOL8Q76FK4 1167 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 GDF7Q7Z4P5 450 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 ADGRA1Q86SQ6 560 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 GAS2L3Q86XJ1 694 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 NECAB1Q8N987 351 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 CAGE1Q8TC20 777 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 ASB10Q8WXI3 467 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 FUBP1Q96AE4 644 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 FAM84BQ96KN1 310 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 JAKMIP1Q96N16 626 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 DCLRE1CQ96SD1 692 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 FSD1Q9BTV5 496 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 SPATA9Q9BWV2 254 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 LSM14BQ9BX40 385 aaKnown RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 ALDH8A1Q9H2A2 487 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 HELLSQ9NRZ9 838 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 LMBRD1Q9NUN5 540 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 MAGEL2Q9UJ55 1249 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 CCNL1Q9UK58 526 aaPredicted RBP2.84□□□□□ -1.95
VPS45-206ENST00000472756 TPCN1Q9ULQ1 816 aa2.84□□□□□ -1.95
VPS45-206ENST00000472756 COL5A3P25940 1745 aaPredicted RBP2.84□□□□□ -1.96
VPS45-206ENST00000472756 RFX7Q2KHR2 1363 aa2.84□□□□□ -1.96
VPS45-206ENST00000472756 RTL9Q8NET4 1388 aa2.84□□□□□ -1.96
VPS45-206ENST00000472756 NUP98P52948 1817 aa2.84□□□□□ -1.96
VPS45-206ENST00000472756 COL1A1P02452 1464 aaPredicted RBP2.84□□□□□ -1.96
VPS45-206ENST00000472756 ZNF831Q5JPB2 1677 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 NHSQ6T4R5 1651 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 DDX60Q8IY21 1712 aaKnown RBP2.83□□□□□ -1.96
VPS45-206ENST00000472756 TRBV23-1A0A0A0MS06 115 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 FSD2A1L4K1 749 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 CCDC85CA6NKD9 419 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 E7EWF7 191 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 HIP1O00291 1037 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 LEFTY2O00292 366 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 MGST3O14880 152 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 CTDNEP1O95476 244 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 FGAP02671 866 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 CASTP20810 708 aaKnown RBP2.83□□□□□ -1.96
VPS45-206ENST00000472756 GYG1P46976 350 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 SSBP2P81877 361 aaPredicted RBP2.83□□□□□ -1.96
VPS45-206ENST00000472756 DGKDQ16760 1214 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 LONRF2Q1L5Z9 754 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 FAM214AQ32MH5 1076 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 TTC39AQ5SRH9 613 aa2.83□□□□□ -1.96
VPS45-206ENST00000472756 MEX3CQ5U5Q3 659 aaKnown RBP2.83□□□□□ -1.96
VPS45-206ENST00000472756 PRR5LQ6MZQ0 368 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms