RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 CTXN3Q4LDR2 81 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SFMBT2Q5VUG0 894 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 DDX53Q86TM3 631 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TMEM173Q86WV6 379 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 KAT5Q92993 513 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SIX2Q9NPC8 291 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 MRPL17Q9NRX2 175 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ITIH6Q6UXX5 1313 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 RALGAPA2Q2PPJ7 1873 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 M0QZQ0 153 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 FOXN3O00409 490 aaPredicted RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 TACC1O75410 805 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 GFPT2O94808 682 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 SOD2P04179 222 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 TYMPP19971 482 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ACAT1P24752 427 aaKnown RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 PCSK1P29120 753 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 CDC25BP30305 580 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 CASP14P31944 242 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 KRT9P35527 623 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ASPAP45381 313 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 GLUD2P49448 558 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 NDST1P52848 882 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 BPIFB4P59827 614 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ERVK-21P61565 698 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 TAP1Q03518 808 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 PTK2Q05397 1052 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ASIC2Q16515 512 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ZNF280DQ6N043 979 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 TAS1R1Q7RTX1 841 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 BCL7CQ8WUZ0 217 aaPredicted RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 JAKMIP2Q96AA8 810 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 B3GALT6Q96L58 329 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 ARID3AQ99856 593 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 MED10Q9BTT4 135 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 EDEM3Q9BZQ6 932 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 GANQ9H2C0 597 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
UBE2F-220ENST00000472479 CAPN11Q9UMQ6 739 aa11.24□□□□□ -0.61
UBE2F-220ENST00000472479 CEP290O15078 2479 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 A0A1W2PPC1 479 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 EPHB6O15197 1021 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 NOL4O94818 638 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 CPB1P15086 417 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 FERP16591 822 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 WARSP23381 471 aaKnown RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 PBX1P40424 430 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 ADKP55263 362 aaKnown RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 ZBED6P86452 979 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 ORC1Q13415 861 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 PSMD5Q16401 504 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 FIGNQ5HY92 759 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 PRSS55Q6UWB4 352 aaPredicted RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 CD300LGQ6UXG3 332 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 ACOT1Q86TX2 421 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 UNC93AQ86WB7 457 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 CNGA4Q8IV77 575 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 DCP1BQ8IZD4 617 aaKnown RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 TCF25Q9BQ70 676 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 HERC2P3Q9BVR0 1158 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 SEPT11Q9NVA2 429 aaKnown RBP11.23□□□□□ -0.61
UBE2F-220ENST00000472479 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 TRIP11Q15643 1979 aa11.23□□□□□ -0.61
UBE2F-220ENST00000472479 A0A1W2PQJ5 194 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 CYP26A1O43174 497 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 THAP12O43422 761 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 NRDCO43847 1150 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 CYP11A1P05108 521 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
UBE2F-220ENST00000472479 FGFR3P22607 806 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 LMO2P25791 158 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 SOX5P35711 763 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 CYP27A1Q02318 531 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 UBE3AQ05086 875 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 TDRD12Q587J7 1177 aaKnown RBP11.22□□□□□ -0.61
UBE2F-220ENST00000472479 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 PLPP4Q5VZY2 271 aa11.22□□□□□ -0.61
UBE2F-220ENST00000472479 OSTM1Q86WC4 334 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms