RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	SLC38A7	Q9NVC3	462 aa		11.46	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.46	□□□□□ -0.58
MRPS18B-208	ENST00000472267	COG5	Q9UP83	839 aa		11.46	□□□□□ -0.58
MRPS18B-208	ENST00000472267		V9GYY5	206 aa	Predicted RBP	11.46	□□□□□ -0.58
MRPS18B-208	ENST00000472267	KPNA7	A9QM74	516 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	BUB1B	O60566	1050 aa	Predicted RBP	11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF623	O75123	536 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	POMC	P01189	267 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CYP1A2	P05177	515 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HSPA8	P11142	646 aa	Known RBP	11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CENPC	Q03188	943 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	INCA1	Q0VD86	236 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LIN9	Q5TKA1	542 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MMS22L	Q6ZRQ5	1243 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TTC39C	Q8N584	583 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LRRC57	Q8N9N7	239 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TMEM35B	Q8NCS4	154 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	C1orf131	Q8NDD1	294 aa	Known RBP	11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GSTCD	Q8NEC7	633 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TSC1	Q92574	1164 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RABGGTA	Q92696	567 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TRIM11	Q96F44	468 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TRAIP	Q9BWF2	469 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NT5C1A	Q9BXI3	368 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TLR10	Q9BXR5	811 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ADAM22	Q9P0K1	906 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GTF3C4	Q9UKN8	822 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SNX12	Q9UMY4	172 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HYOU1	Q9Y4L1	999 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CEP83	Q9Y592	693 aa		11.45	□□□□□ -0.58
MRPS18B-208	ENST00000472267	BRCA2	P51587	3418 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TDRD15	B5MCY1	1934 aa	Known RBP	11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CEP350	Q5VT06	3117 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CASTOR2	A6NHX0	329 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF185	O15231	689 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	VDR	P11473	427 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RRM1	P23921	792 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LRPAP1	P30533	357 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CXCR5	P32302	372 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MESD	Q14696	234 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	WHAMMP3	Q1A5X7	153 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SOWAHA	Q2M3V2	549 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MEI1	Q5TIA1	1274 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LLGL2	Q6P1M3	1020 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SLC39A5	Q6ZMH5	540 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MON1B	Q7L1V2	547 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PEX26	Q7Z412	305 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ACOT1	Q86TX2	421 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SYCE1	Q8N0S2	351 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	ZNF333	Q96JL9	665 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	OSBPL9	Q96SU4	736 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SNX25	Q9H3E2	840 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	UBN1	Q9NPG3	1134 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RGS18	Q9NS28	235 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PCDHGC3	Q9UN70	934 aa		11.44	□□□□□ -0.58
MRPS18B-208	ENST00000472267		A8MXQ7	604 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PODXL	O00592	558 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HUS1	O60921	280 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NBN	O60934	754 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MICAL2	O94851	1124 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LSM8	O95777	96 aa	Known RBP	11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PDGFRB	P09619	1106 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MYBL1	P10243	752 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	IGFBP6	P24592	240 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CLCNKB	P51801	687 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LBX1	P52954	281 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LILRA4	P59901	499 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	NAA30	Q147X3	362 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	RPS6KA1	Q15418	735 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TRIM60	Q495X7	471 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SGO2	Q562F6	1265 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SMYD5	Q6GMV2	418 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	SLC24A5	Q71RS6	500 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	PHF13	Q86YI8	300 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CEP112	Q8N8E3	955 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	APPL2	Q8NEU8	664 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DIS3L	Q8TF46	1054 aa	Known RBP	11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	COG1	Q8WTW3	980 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	LINC01599	Q8WXQ3	324 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	BTBD6	Q96KE9	485 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CRISPLD2	Q9H0B8	497 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GDAP2	Q9NXN4	497 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	AMFR	Q9UKV5	643 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	L1RE1	Q9UN81	338 aa		11.43	□□□□□ -0.58
MRPS18B-208	ENST00000472267	DCDC2C	A8MYV0	355 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267		C9IYK1	514 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267		M0QYV0	167 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CYB561D2	O14569	222 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	HCRT	O43612	131 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	KIF4A	O95239	1232 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	FGFR1	P11362	822 aa		11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	TCP1	P17987	556 aa	Known RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	GNL1	P36915	607 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	MNX1	P50219	401 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPS18B-208	ENST00000472267	CCL23	P55773	120 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms