RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CNTN6Q9UQ52 1028 aa20.51■□□□□ 0.87
PSPC1-203ENST00000471658 GOLGA6L6A8MZA4 724 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 EFEMP2O95967 443 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 PTMAP06454 111 aaKnown RBP20.5■□□□□ 0.87
PSPC1-203ENST00000471658 ODC1P11926 461 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 WARSP23381 471 aaKnown RBP20.5■□□□□ 0.87
PSPC1-203ENST00000471658 CHRDL2Q6WN34 429 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 CEP57Q86XR8 500 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 LPIN3Q9BQK8 851 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 SPG21Q9NZD8 308 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 AIPL1Q9NZN9 384 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 MYO6Q9UM54 1294 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
PSPC1-203ENST00000471658 KIAA1671Q9BY89 1806 aa20.5■□□□□ 0.87
PSPC1-203ENST00000471658 CA3P07451 260 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 PAX3P23760 479 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 GNL1P36915 607 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 RAD23BP54727 409 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 MLLT1Q03111 559 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 INCA1Q0VD86 236 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 ASIC2Q16515 512 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 C17orf80Q9BSJ5 609 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 SNX25Q9H3E2 840 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 DPEP3Q9H4B8 488 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 PCDHB12Q9Y5F1 795 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 SF3B1O75533 1304 aaKnown RBP eCLIP20.49■□□□□ 0.872e-6■■■■■ 128.2
PSPC1-203ENST00000471658 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 A8MXQ7 604 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 GABRDO14764 452 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 TRAPPC3O43617 180 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 CYP11A1P05108 521 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 ACAT1P24752 427 aaKnown RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 ZNF132P52740 706 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 GSDMDP57764 484 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 YWHAEP62258 255 aaKnown RBP20.49■□□□□ 0.87
PSPC1-203ENST00000471658 KIAA0319Q5VV43 1072 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 SLC47A2Q86VL8 602 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 SLC4A11Q8NBS3 891 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 CHP1Q99653 195 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 PBX4Q9BYU1 374 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 AAASQ9NRG9 546 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 PCDHA11Q9Y5I1 949 aa20.49■□□□□ 0.87
PSPC1-203ENST00000471658 PLEKP08567 350 aaPredicted RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 FGFR3P22607 806 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 HNRNPH3P31942 346 aaKnown RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 CDR1P51861 262 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 CCDC142Q17RM4 750 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 RTP2Q5QGT7 225 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 HGSNATQ68CP4 663 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 TDHQ8IZJ6 230 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 TMEM86AQ8N2M4 240 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 KLHL23Q8NBE8 558 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 SYN2Q92777 582 aaPredicted RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 TMEM169Q96HH4 297 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 ZNF830Q96NB3 372 aaPredicted RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 PANX2Q96RD6 677 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 NUCKS1Q9H1E3 243 aaKnown RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 PRO3102Q9H379 93 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 DDX43Q9NXZ2 648 aaKnown RBP20.48■□□□□ 0.87
PSPC1-203ENST00000471658 MTUS1Q9ULD2 1270 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 STXBP5LQ9Y2K9 1186 aa20.48■□□□□ 0.87
PSPC1-203ENST00000471658 ATP2C2O75185 946 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 FGF18O76093 207 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 FAM163BP0C2L3 166 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 FERP16591 822 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 TYMPP19971 482 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 SSTR3P32745 418 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-203ENST00000471658 CTNNB1P35222 781 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 BMPR1AP36894 532 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 ACOT1Q86TX2 421 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 METTL23Q86XA0 190 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 RNF168Q8IYW5 571 aaPredicted RBP20.47■□□□□ 0.87
PSPC1-203ENST00000471658 TMEM176AQ96HP8 235 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 TMEM209Q96SK2 561 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 ARHGAP20Q9P2F6 1191 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 GBF1Q92538 1859 aa20.47■□□□□ 0.87
PSPC1-203ENST00000471658 PDE4DIPQ5VU43 2346 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 KLHL30Q0D2K2 578 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 MEA1Q16626 185 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 TSR1Q2NL82 804 aaKnown RBP20.46■□□□□ 0.87
PSPC1-203ENST00000471658 VARS2Q5ST30 1063 aaKnown RBP20.46■□□□□ 0.87
PSPC1-203ENST00000471658 OVOS1Q6IE37 1185 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 NOP9Q86U38 636 aaKnown RBP20.46■□□□□ 0.87
PSPC1-203ENST00000471658 TMEM139Q8IV31 216 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 LRRC8AQ8IWT6 810 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 C12orf29Q8N999 325 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 SLC20A1Q8WUM9 679 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 ZSWIM1Q9BR11 485 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 NT5C1AQ9BXI3 368 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 NKX2-4Q9H2Z4 354 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 HAUS4Q9H6D7 363 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 DSEQ9UL01 958 aa20.46■□□□□ 0.87
PSPC1-203ENST00000471658 SYN3O14994 580 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 BRD2P25440 801 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 LHX1P48742 406 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 PSMC1P62191 440 aaKnown RBP20.45■□□□□ 0.87
PSPC1-203ENST00000471658 TAP1Q03518 808 aa20.45■□□□□ 0.87
PSPC1-203ENST00000471658 YWHAHQ04917 246 aaPredicted RBP20.45■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms