RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RBM43Q6ZSC3 357 aaKnown RBP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 C1orf186Q6ZWK4 172 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 SV2BQ7L1I2 683 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 KCNK18Q7Z418 384 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 HS6ST3Q8IZP7 471 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 CELF5Q8N6W0 485 aaKnown RBP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 ZSCAN18Q8TBC5 510 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-206ENST00000471037 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 FAM3CQ92520 227 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 PAGE5Q96GU1 130 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 PARD6AQ9NPB6 346 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 KCNG1Q9UIX4 513 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 USP18Q9UMW8 372 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 YIPF1Q9Y548 306 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 MYH11P35749 1972 aa9.84□□□□□ -0.83
SF3A1-206ENST00000471037 F5P12259 2224 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
SF3A1-206ENST00000471037 ZNF263O14978 683 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SLC16A4O15374 487 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 LRP3O75074 770 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SMC2O95347 1197 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 VNN2O95498 520 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 PLA2G4BP0C869 781 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CHRNB1P11230 501 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 MYL4P12829 197 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CYP3A5P20815 502 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 LRPAP1P30533 357 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 VIPR2P41587 438 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 AFMP43652 599 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SLC12A3P55017 1021 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 YWHAHQ04917 246 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-206ENST00000471037 MCL1Q07820 350 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 PLD1Q13393 1074 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 MCM6Q14566 821 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TEAD2Q15562 447 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CAMK4Q16566 473 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 ZSCAN23Q3MJ62 389 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CNNM4Q6P4Q7 775 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 ZPBP2Q6X784 338 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 RNF19BQ6ZMZ0 732 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TMC8Q8IU68 726 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SPEM1Q8N4L4 309 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SYT2Q8N9I0 419 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TMEM161BQ8NDZ6 487 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 SHKBP1Q8TBC3 707 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 LRRC15Q8TF66 581 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 KCNN1Q92952 543 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 ZBTB45Q96K62 511 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 LRRC3Q9BY71 257 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 LMAN1LQ9HAT1 526 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 KCND2Q9NZV8 630 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TUBGCP4Q9UGJ1 667 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 RAB23Q9ULC3 237 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TICRRQ7Z2Z1 1910 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 CITO14578 2027 aa9.83□□□□□ -0.84
SF3A1-206ENST00000471037 TTC26A0AVF1 554 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 HEPACAM2A8MVW5 462 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 CHADO15335 359 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 CLDN3O15551 220 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 RETP07949 1114 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 MAPTP10636 758 aaKnown RBP9.82□□□□□ -0.84
SF3A1-206ENST00000471037 HARSP12081 509 aaKnown RBP9.82□□□□□ -0.84
SF3A1-206ENST00000471037 PLS3P13797 630 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 GJA1P17302 382 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 CCNE1P24864 410 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 CNR2P34972 360 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 CXCL12P48061 93 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 SMTNP53814 917 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 SATB1Q01826 763 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 DPYDQ12882 1025 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 STRN3Q13033 797 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 GPR17Q13304 367 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 PNOCQ13519 176 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 LRRC32Q14392 662 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 GAS6Q14393 721 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 ZBTB6Q15916 424 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 NETO1Q8TDF5 533 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 SMARCE1Q969G3 411 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 RSPRY1Q96DX4 576 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 C7orf25Q9BPX7 421 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 TRIM9Q9C026 710 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 DNAJC25Q9H1X3 360 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 C8orf33Q9H7E9 229 aaPredicted RBP9.82□□□□□ -0.84
SF3A1-206ENST00000471037 KIAA1468Q9P260 1216 aa9.82□□□□□ -0.84
SF3A1-206ENST00000471037 UBQLN1Q9UMX0 589 aaKnown RBP9.82□□□□□ -0.84
SF3A1-206ENST00000471037 A0A1W2PRU2 124 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 MYBPHLA2RUH7 354 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 DCDC2BA2VCK2 349 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 OR6C75A6NL08 312 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 SFI1A8K8P3 1242 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 SLC30A4O14863 429 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 ADRB1P08588 477 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 CLTAP09496 248 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 PRR29P0C7W0 189 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 CXCL8P10145 99 aa9.81□□□□□ -0.84
SF3A1-206ENST00000471037 TYMPP19971 482 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms