RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 VAV2P52735 878 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 NDST1P52848 882 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 WDR5P61964 334 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 CYP27A1Q02318 531 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 RNASELQ05823 741 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 FPGSQ05932 587 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TAF3Q5VWG9 929 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 ZNF280BQ86YH2 543 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 C7orf61Q8IZ16 206 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 ADGRF2Q8IZF7 708 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM86AQ8N2M4 240 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 LRRC43Q8N309 656 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 PDCL2Q8N4E4 241 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 SLC4A11Q8NBS3 891 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 KBTBD7Q8WVZ9 684 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TOP1MTQ969P6 601 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM176AQ96HP8 235 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 SUSD3Q96L08 255 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 SENP8Q96LD8 212 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 FAM193BQ96PV7 902 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TWNKQ96RR1 684 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 PCDHB18PQ96TA0 734 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 MRPL45Q9BRJ2 306 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 PAAF1Q9BRP4 392 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TMEM175Q9BSA9 504 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TSGA10Q9BZW7 698 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 ACP6Q9NPH0 428 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 TRMT1Q9NXH9 659 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 CACNG4Q9UBN1 327 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 DSEQ9UL01 958 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 INTUQ9ULD6 942 aa9.28□□□□□ -0.92
HDLBP-233ENST00000470710 PDCD11Q14690 1871 aaKnown RBP9.28□□□□□ -0.92
HDLBP-233ENST00000470710 MKI67P46013 3256 aaKnown RBP9.27□□□□□ -0.92
HDLBP-233ENST00000470710 TBKBP1A7MCY6 615 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PJA2O43164 708 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 THAP12O43422 761 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 MED7O43513 233 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 KIF4AO95239 1232 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 CYP1A1P04798 512 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ACRP10323 421 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 VDRP11473 427 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ODC1P11926 461 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 TYMPP19971 482 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 IGFBP6P24592 240 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 BRD2P25440 801 aaKnown RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 GNL1P36915 607 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ARHGAP25P42331 645 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 LHX1P48742 406 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 STILQ15468 1287 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 CLEC16AQ2KHT3 1053 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 TIGD5Q53EQ6 642 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ZNF394Q53GI3 561 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 CCDC122Q5T0U0 273 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 WSCD1Q658N2 575 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PPP1R2P3Q6NXS1 205 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PSRC1Q6PGN9 363 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 C16orf59Q7L2K0 433 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 KIAA1328Q86T90 577 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PALB2Q86YC2 1186 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 CRYBG2Q8N1P7 616 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 TFAP2BQ92481 460 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 BADQ92934 168 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ZNF689Q96CS4 500 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ZSWIM1Q9BR11 485 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 ISCUQ9H1K1 167 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 SNX25Q9H3E2 840 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 RC3H2Q9HBD1 1191 aaKnown RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PCDHB8Q9UN66 801 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 PCDHGC3Q9UN70 934 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 STXBP5LQ9Y2K9 1186 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 SCN1AP35498 2009 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 SCN5AQ14524 2016 aa9.27□□□□□ -0.93
HDLBP-233ENST00000470710 TRIP11Q15643 1979 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 RCCD1A6NED2 376 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 BTNL10A8MVZ5 291 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 A8MXQ7 604 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 O00370 1275 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 RTN2O75298 545 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 CALCAP01258 141 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 FGBP02675 491 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 TUBB4AP04350 444 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 ALDH2P05091 517 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 H2AFZP0C0S5 128 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 ATXN8OSP0DMR3 200 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 UNGP13051 313 aaPredicted RBP9.26□□□□□ -0.93
HDLBP-233ENST00000470710 CD19P15391 556 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 CDH5P33151 784 aaPredicted RBP9.26□□□□□ -0.93
HDLBP-233ENST00000470710 OR1G1P47890 313 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 DEFB103AP81534 67 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 KIF5AQ12840 1032 aa9.26□□□□□ -0.93
HDLBP-233ENST00000470710 CNGA2Q16280 664 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms