RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SNX19Q92543 992 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 RSAD1Q9HA92 442 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 METTL14Q9HCE5 456 aaKnown RBP5□□□□□ -1.61
BRCA2-202ENST00000470094 GABBR1Q9UBS5 961 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 CPA4Q9UI42 421 aa5□□□□□ -1.61
BRCA2-202ENST00000470094 EPN1Q9Y6I3 576 aaPredicted RBP5□□□□□ -1.61
BRCA2-202ENST00000470094 MAST3O60307 1309 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 A0A088AWK7 358 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 M0QYG6 137 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 ERC2O15083 957 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PRPF3O43395 683 aaKnown RBP4.99□□□□□ -1.61
BRCA2-202ENST00000470094 KIF20AO95235 890 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 ESRRBO95718 433 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 MYBP10242 640 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 KCNJ5P48544 419 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 SOX8P57073 446 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PURAQ00577 322 aaKnown RBP4.99□□□□□ -1.61
BRCA2-202ENST00000470094 HLXQ14774 488 aaPredicted RBP4.99□□□□□ -1.61
BRCA2-202ENST00000470094 MLC1Q15049 377 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 SLC30A10Q6XR72 485 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 Q6ZNX1 250 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 MICALCLQ6ZW33 695 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 LNX2Q8N448 690 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PCSK9Q8NBP7 692 aaKnown RBP4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PSD4Q8NDX1 1056 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PLBD2Q8NHP8 589 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 RUNDC1Q96C34 613 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 LRIG1Q96JA1 1093 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 KCTD5Q9NXV2 234 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 ETAA1Q9NY74 926 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 KLHL42Q9P2K6 505 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 STAP2Q9UGK3 403 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 PCDHA6Q9UN73 950 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 AGAP1Q9UPQ3 857 aa4.99□□□□□ -1.61
BRCA2-202ENST00000470094 GOLGA6CA6NDK9 693 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 GOLGA6BA6NDN3 693 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 VPS4BO75351 444 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 GOLGA6DP0CG33 693 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 SRGNP10124 158 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 HDCP19113 662 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 PROZP22891 400 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 NPTX2P47972 431 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 SF3B3Q15393 1217 aaKnown RBP4.98□□□□□ -1.61
BRCA2-202ENST00000470094 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 ARHGAP29Q52LW3 1261 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 PCSK4Q6UW60 755 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 SLC9A6Q92581 669 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 AGAP2Q99490 1192 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 LRFN3Q9BTN0 628 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 SLITRK6Q9H5Y7 841 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 C1orf112Q9NSG2 853 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 GOLGA6AQ9NYA3 693 aa4.98□□□□□ -1.61
BRCA2-202ENST00000470094 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 A0A1W2PPL8 197 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 PEX1O43933 1283 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 TUSC2O75896 110 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 SOAT2O75908 522 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 PIM1P11309 404 aaPredicted RBP4.97□□□□□ -1.61
BRCA2-202ENST00000470094 CHRM3P20309 590 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 ITGALP20701 1170 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 GATA3P23771 443 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 NDUFV1P49821 464 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 TCF15Q12870 199 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 FAM160B1Q5W0V3 765 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 TAF2Q6P1X5 1199 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 OVCH2Q7RTZ1 564 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 TMPRSS9Q7Z410 1059 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 PPP1R32Q7Z5V6 425 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
BRCA2-202ENST00000470094 FAM46DQ8NEK8 389 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 SLC30A5Q8TAD4 765 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 B3GNT5Q9BYG0 378 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 MRPS18AQ9NVS2 196 aaKnown RBP4.97□□□□□ -1.61
BRCA2-202ENST00000470094 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
BRCA2-202ENST00000470094 LRIT1Q9P2V4 623 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.97□□□□□ -1.61
BRCA2-202ENST00000470094 RAD54BQ9Y620 910 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 SPATA31A3Q5VYP0 1347 aa4.97□□□□□ -1.61
BRCA2-202ENST00000470094 A0A0B4J269 797 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 FAM227AF5H4B4 570 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 F5H697 171 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 YY2O15391 372 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 TRIAP1O43715 76 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 MARCH6O60337 910 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 UNC5CO95185 931 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 MPLP40238 635 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 AGFG1P52594 562 aaKnown RBP4.96□□□□□ -1.62
BRCA2-202ENST00000470094 GPSM2P81274 684 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 MRPS35P82673 323 aaKnown RBP4.96□□□□□ -1.62
BRCA2-202ENST00000470094 FOXI1Q12951 378 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 TUBB3Q13509 450 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 ERCC6LQ2NKX8 1250 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 AMOTQ4VCS5 1084 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 NPNTQ6UXI9 565 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 FAM9AQ8IZU1 332 aaPredicted RBP4.96□□□□□ -1.62
BRCA2-202ENST00000470094 B3GALNT2Q8NCR0 500 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms