RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 KLRC4O43908 158 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 SMC2O95347 1197 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
FAM228B-203ENST00000469867 RFX1P22670 979 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 PABPC1LQ4VXU2 614 aaKnown RBP12.57□□□□□ -0.4
FAM228B-203ENST00000469867 HAUS6Q7Z4H7 955 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 ZNF461Q8TAF7 563 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 DNMT3BQ9UBC3 853 aaKnown RBP12.57□□□□□ -0.4
FAM228B-203ENST00000469867 TUBGCP4Q9UGJ1 667 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 CDH7Q9ULB5 785 aa12.57□□□□□ -0.4
FAM228B-203ENST00000469867 WDR27A2RRH5 827 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 ANHXE9PGG2 379 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
FAM228B-203ENST00000469867 HOXA9P31269 272 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 TNFSF9P41273 254 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 GPC5P78333 572 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 GPBP1Q86WP2 473 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 AK8Q96MA6 479 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 GSDMAQ96QA5 445 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 BACE2Q9Y5Z0 518 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 TRIM49BA6NDI0 452 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 ANKRD65E5RJM6 399 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 PRRG1O14668 218 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 IKBKBO14920 756 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 NUBP1P53384 320 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 PMS1P54277 932 aaKnown RBP12.56□□□□□ -0.4
FAM228B-203ENST00000469867 FANCCQ00597 558 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 ZBTB41Q5SVQ8 909 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 SLC8B1Q6J4K2 584 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 ZPBP2Q6X784 338 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 IRF2BPLQ9H1B7 796 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 TBC1D17Q9HA65 648 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
FAM228B-203ENST00000469867 DCNP07585 359 aaKnown RBP12.55□□□□□ -0.4
FAM228B-203ENST00000469867 PRCPP42785 496 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 MCL1Q07820 350 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 SLC5A9Q2M3M2 681 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 GLIS3Q8NEA6 775 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 DNAI1Q9UI46 699 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 CEP250Q9BV73 2442 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 MYMKA6NI61 221 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 K7ENM7 598 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 RHOP08100 348 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 ATF2P15336 505 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 ELF1P32519 619 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
FAM228B-203ENST00000469867 LIG4P49917 911 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 NCKAP1LP55160 1127 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 CTXN3Q4LDR2 81 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 KCTD17Q8N5Z5 321 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 KXD1Q9BQD3 176 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 RTP3Q9BQQ7 232 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 CYP4F11Q9HBI6 524 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 KCNG1Q9UIX4 513 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 FBXL5Q9UKA1 691 aa12.55□□□□□ -0.4
FAM228B-203ENST00000469867 MRPS23Q9Y3D9 190 aaKnown RBP12.55□□□□□ -0.4
FAM228B-203ENST00000469867 TIMM13Q9Y5L4 95 aaPredicted RBP12.55□□□□□ -0.4
FAM228B-203ENST00000469867 ZFP37Q9Y6Q3 630 aaPredicted RBP12.55□□□□□ -0.4
FAM228B-203ENST00000469867 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
FAM228B-203ENST00000469867 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 STK4Q13043 487 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ANGPT1Q15389 498 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 TMC6Q7Z403 805 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 TRIML1Q8N9V2 468 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 PARVGQ9HBI0 331 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ODF2LQ9ULJ1 636 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.54□□□□□ -0.4
FAM228B-203ENST00000469867 OTOGLQ3ZCN5 2332 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 SYN3O14994 580 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ABLIM3O94929 683 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 FAM13AO94988 1023 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ZRANB2O95218 330 aaKnown RBP eCLIP12.54□□□□□ -0.4
FAM228B-203ENST00000469867 SEC24AO95486 1093 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 LRG1P02750 347 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 CLTAP09496 248 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 ASCL5Q7RTU5 278 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
FAM228B-203ENST00000469867 SUSD3Q96L08 255 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms