RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CUTAO60888 179 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
COL9A3-208ENST00000469802 LDHAP00338 332 aaKnown RBP17.6■□□□□ 0.41
COL9A3-208ENST00000469802 PDIA4P13667 645 aaKnown RBP17.6■□□□□ 0.41
COL9A3-208ENST00000469802 GJA1P17302 382 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 EPHB3P54753 998 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 TEAD2Q15562 447 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 SV2CQ496J9 727 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 WSCD1Q658N2 575 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 VITQ6UXI7 678 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 SYCP3Q8IZU3 236 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 C1orf127Q8N9H9 656 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 ZSCAN18Q8TBC5 510 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-208ENST00000469802 PSMG2Q969U7 264 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 TMEM206Q9H813 350 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 LTB4R2Q9NPC1 389 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 SLC27A5Q9Y2P5 690 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 ASB3Q9Y575 518 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
COL9A3-208ENST00000469802 ZSCAN22P10073 491 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-208ENST00000469802 ATF6P18850 670 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 HOXD13P35453 343 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 PNPLA4P41247 253 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 ALDH1A3P47895 512 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 GRM2Q14416 872 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 SLC39A12Q504Y0 691 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 GAREM2Q75VX8 874 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 HSCBQ8IWL3 235 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 MKNK1Q9BUB5 465 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 LRRC27Q9C0I9 530 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 GPR88Q9GZN0 384 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 ZNF334Q9HCZ1 680 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-208ENST00000469802 TRPV5Q9NQA5 729 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 MTF2Q9Y483 593 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-208ENST00000469802 GVINP1Q7Z2Y8 2422 aa17.59■□□□□ 0.41
COL9A3-208ENST00000469802 A0A1W2PRU2 124 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 GOLGA8IPA6NC78 632 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 GOLGA8JA6NMD2 632 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 KIAA0391O15091 583 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 SOAT2O75908 522 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 F13A1P00488 732 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 ITGB3P05106 788 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 PSMC3P17980 439 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 TARSP26639 723 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 POLR2BP30876 1174 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 TFAMQ00059 246 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 EHHADHQ08426 723 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 SMARCB1Q12824 385 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 TPRG1Q6ZUI0 275 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 DNAJB7Q7Z6W7 309 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 LRRTM3Q86VH5 581 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 METTL23Q86XA0 190 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 C1orf210Q8IVY1 113 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 MAML2Q8IZL2 1156 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 GPD1LQ8N335 351 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 C2orf15Q8WU43 125 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 DEPDC1BQ8WUY9 529 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 NKD2Q969F2 451 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 DHX58Q96C10 678 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 FAM84AQ96KN4 292 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 TRMT61BQ9BVS5 477 aaKnown RBP17.58■□□□□ 0.4
COL9A3-208ENST00000469802 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 HEBP1Q9NRV9 189 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 ITGA11Q9UKX5 1188 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 ANAPC1Q9H1A4 1944 aa17.58■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF292O60281 2723 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 ARNTLO00327 626 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL9A3-208ENST00000469802 CD72P21854 359 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 VIPR2P41587 438 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 MAGEA9P43362 315 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 TUFMP49411 452 aaKnown RBP17.57■□□□□ 0.4
COL9A3-208ENST00000469802 PKP1Q13835 747 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 UBXN2BQ14CS0 331 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 STXBP5Q5T5C0 1151 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 SCARA3Q6AZY7 606 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 STXBP4Q6ZWJ1 553 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 ITIH5Q86UX2 942 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 ZNF687Q8N1G0 1237 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 THEM5Q8N1Q8 247 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 IQUBQ8NA54 791 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 KCNG4Q8TDN1 519 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 CLDN23Q96B33 292 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 RSPRY1Q96DX4 576 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 LPIN3Q9BQK8 851 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 BRD9Q9H8M2 597 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 PDE11AQ9HCR9 933 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 SIX4Q9UIU6 781 aa17.57■□□□□ 0.4
COL9A3-208ENST00000469802 HELZP42694 1942 aaKnown RBP17.57■□□□□ 0.4
COL9A3-208ENST00000469802 PTPRJQ12913 1337 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 FAM170BA6NMN3 283 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 FGF19O95750 216 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 ASIC1P78348 528 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 AMPD3Q01432 767 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 FCHO2Q0JRZ9 810 aa17.56■□□□□ 0.4
COL9A3-208ENST00000469802 FZD5Q13467 585 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms